AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi6g01440 ATGGGTTGCAGAAATCAAGAGAAAGACAGATCATCTTCATCTTCATCGTCAATTGTAAACGATGCGTTGCTGTTAACCACCATGTGTCTCATTGGTCTCTCCGTTGATGTTCATATCAAGGATGGCTCTGTTTATTCTGGAATCTTCCACACTGCCTGCGTCGAACATCGTTATGCTATTGTGTTAAAACGAGCGAAGATGATGAAGAAAGGGAGTTGTAACTCAAATGTGGCGAGTGAGGAGGTGATCCCCACACTCATAATCCAATCTGAGGATCTTGTTCAAGTAATTGCTAAGAAAGTAATAATTCCGGCAAATGGTGTTGCTGGACACGGAACTGGAGATGAAACAGGGGCTGTTGCGTGCTCTTTTTCTTCTAATGGAACAGAATCAAATAAAACAATGACTAGCAAGTCAAACGTTGGTCAACCGCACACTAATCAAACACGACGGTCGTCTGGAACTGAAAACGGGCTTGCTAATGGATTTAGACCCGAGAACAGTATTCACTCAACCAATGCTCTTGAAGCAAAAGATACAGATGTGAAAGATTCAACAAAGAAGGAAGAATGTTTGAAGGATCCGGATGATAGCAGAAAAAATGGTAATCACACTAGTTCATCTACTCCAAGTGAAACCGTCACTACAAAAATCTCAAATTCTAATCGAACCACTAAGGAGTTTAAACTCAACCCCGGAGCAAAGATATTTTCTCCATCATTTCCAAATAAAAGATCACCGACCCCTCAAGCAATGGTGACGGGCACAAATCTTGTATACAATCCTGACAGTCATCCTAGTGTCCCGGTTGCTGGGCCACAGCCCGAAGTTGAAATCGGCCCGTTTGCTACTCGTTCAGTGCCCGTTAAGTTTGTTCCATATGGTGGCAATGATGTACCACACCCTGCTCCAATTGTTGGATACATGACAAACAGGAGTCAACCCGTCAGATACGGGCCGTATCATCCTGCGGTCCAAACAGCACCTACCTATGTTCAACCTAGCTCTCAAAATGTAATGGTTGGGCGATTGGGACCCGTTGTCTACGTTCATCCAGTTTCCCAAGACATGGTCCCAAATACGAATAGCTTCTCCTCTGTTTTAACTCCACACCAACTCCATGTTCCTAAACACCAAGGAAACACGACGGCTCAAGCATTGCAACTACCATTTATAGGCGGTGGGGTTGGTGGTCAGGCACCATATGTCTTGCCGGGCCACGTCCCAATATCACAACTGCCTTATCCTGTGATGCATCCGATCGCAATCCCGGGATCTAATGGTTTTTTGGTATCAAAATTTTCTTGA 1308 44.42 MGCRNQEKDRSSSSSSSIVNDALLLTTMCLIGLSVDVHIKDGSVYSGIFHTACVEHRYAIVLKRAKMMKKGSCNSNVASEEVIPTLIIQSEDLVQVIAKKVIIPANGVAGHGTGDETGAVACSFSSNGTESNKTMTSKSNVGQPHTNQTRRSSGTENGLANGFRPENSIHSTNALEAKDTDVKDSTKKEECLKDPDDSRKNGNHTSSSTPSETVTTKISNSNRTTKEFKLNPGAKIFSPSFPNKRSPTPQAMVTGTNLVYNPDSHPSVPVAGPQPEVEIGPFATRSVPVKFVPYGGNDVPHPAPIVGYMTNRSQPVRYGPYHPAVQTAPTYVQPSSQNVMVGRLGPVVYVHPVSQDMVPNTNSFSSVLTPHQLHVPKHQGNTTAQALQLPFIGGGVGGQAPYVLPGHVPISQLPYPVMHPIAIPGSNGFLVSKFS 435
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi6g01440 435 PANTHER ATAXIN 2-RELATED 135 420 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Cobi6g01440 435 MobiDBLite consensus disorder prediction 176 201 - -
Cobi6g01440 435 MobiDBLite consensus disorder prediction 202 223 - -
Cobi6g01440 435 Pfam Ataxin 2 SM domain 20 99 IPR025852 -
Cobi6g01440 435 MobiDBLite consensus disorder prediction 128 223 - -
Cobi6g01440 435 MobiDBLite consensus disorder prediction 128 175 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi6g01440 - -