Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi9g01273	ATGAGGAGGTGCTTATTAGGGTTTCATCCTCCTCACTTCTCTGAGGAGGAGGCATGGCTTCCTGCCTGGCTTCAGCCTTCTAATCAACCACCACAACCCTTGGAGGAGGAAATTGGGCGCCTTCAACAAAGCACCAGTCCTAGAGAAGAAAATGGGAGTTTGTCGAATGTCCATTTATTCTTATCTGGAGATGACGACCACAATTCACCAATTACATCTTCTACCAATCATCAACTTCAGTATCATCTTCATCTCTCATCATTTGAACAAGATTCTCAACCAGATAAGTCTGATTTCAAAGTTATCCCCAGCCTAGAAGGTAGCTGCATCACCGATGCAATTGAACTAGCTGTCGCAGCATCAGAAGCATTAACAATACACAAGGTATTAAAAGATCAACTTTTTATTGCATCCTCTGCTGTACTCGAGGCTGCAATACGTTTAAAACACGCACGTTTGGAGAATCTCACTGACTCACTTGACGAAACCAATGACCTTCACTTTGACTTTCCTTCTGATTTGGACATGATAGATGCATATGAAGATGTAGGGTTAACTGTTGCCAACCTTGGTCATCCGACTGCTTCTTGTTCCATATCTCATGTTAATGACACCTTTTCGTCTGAAAATAATACATCTAATGCCAATCACAAGGGGGGAAATATATTGGAATCTTGTGATAATGAATCATTAGGTACACAGAACGCTGATCTGGCGTCTGATGTTGATCATGTGTTTAACTGTTCGATTGAGCAAACTGATTTTTGTGAAGCAGAGAGGGAGGGCTTTGCAATTAGGGATCCGACATCATCTCAAACCATTTTAAGATCTAATGATGAAAGACAAGATAAGATTACAAATCTGGTTCCGGATAGATTTCAAAGCCGCTGGTTTGGTGGTTGGACGATGAAGAGTGAGGAAAGCATTCCTGCAGTTACAAATGATAAACATAAAAGAACCACTAACGAGATATTTGCCAACGAAATGAGTTCTCTGTCAGAATCTGCTGATATTGCTCCCGACATGAGTTCCTGCGTACAGATCAGACAAGATAAAGACAAAACTGTCGCTCAATCAAGTGTAGCTCTTCAACTTGCATACGAGAATAGTGATAATAACATGAATTTGGTTTCTGGTGATGTGGCGGTTTCTCCCTGTGTCTCCCCTGTGGACCCTATGTGTTCTGTTGTTCCTTGCAGCTATGGTTCAGATTGTGTCGCATCTCAGAACACTGAACACCAGGAAAATCTCAACAACCATCTGGGCTCCACGGTTCAACCTAATTCGGGTAATCTAATACTTAATCGTGAGAGTTCACCCGCTATACACAGACAGGTGGCATCCCTTAAAACTTACAGCATGCTTTATCCAACATGTGATCCTTATTTAGACAAAGAGCATGCACGTGTCGATTCATCATCACTTAAGCATAATCAGACTGCAAAAGCAGATACCGCGTTGACTGGTCAGCACAAGGAGACCACCAAGGTTTCCCACATGGTAGAATCTATAGTTCCGAGACGAAAACGTGTCCGTTTTTCAGAAACCGAAATTTGTTACCGACAAGCAAAAAAGTTCCAAAAAACGCGACTCAAAGATTCTTCAGTTGCAAGTAGAATTTGCAGACGGGTGACAAGAAGTAAATTTAAACCTCGGGAAGCTAAAAAAACCAACAAGATTTTACTACAAGATCTAAAGTTTTTACTAACAGGATTTTCGGTCAAGAAACATAAACAAATCAAGAATTTAATTCAAGAAAATGGTGGAATAGTTTTTGATGATATTCCTTCAGTACCCATAAGAAAGAAAAGCTTCAAACTTCCACTTATTTTGTGTCCCAAAAAACTGCTAACAACAAAGTTCTTGTATGGATGTGCAGTAAATGCAAGTATTCTTAATATAACATGGTTGTTTGATTCAGTTGATGAAGGCTTGATCTTACCACATAAGAAGTACAAGGTTTTAAACGATCATGCAACCAATAACCGTTTTATTTTCGAGGATATTGCCATCATGCTTCATGGGAAACAAGATTTCTGCAGTAAAATGGGAAAGGTTGTAAAGCATGGAGGTGGGTCGGTTTTCAAAACGTTTCATTGGTTGGTTAAGAGTCTTGATTCTAAGAAGGTGTCAGTGGGGGTTATTGTCGTGGAGGACGAAAATGGTATTTCGCGTCAGTTGAAACAATGTGCCTTAGAGCAAAAGATTTCTGTGATGCCTTATAGTTGGATTATAAACAGCTTATATGCAGGAAGGAGCATAAAAGCAAAGATCAAAGCTACATATCCTGATGCATTCCCAGATAATTTAACATTAGAATCACTCGACCGAAGGCCAGATCTCAATGAAACTCTTTTATTATGA	2364	39.97	MRRCLLGFHPPHFSEEEAWLPAWLQPSNQPPQPLEEEIGRLQQSTSPREENGSLSNVHLFLSGDDDHNSPITSSTNHQLQYHLHLSSFEQDSQPDKSDFKVIPSLEGSCITDAIELAVAASEALTIHKVLKDQLFIASSAVLEAAIRLKHARLENLTDSLDETNDLHFDFPSDLDMIDAYEDVGLTVANLGHPTASCSISHVNDTFSSENNTSNANHKGGNILESCDNESLGTQNADLASDVDHVFNCSIEQTDFCEAEREGFAIRDPTSSQTILRSNDERQDKITNLVPDRFQSRWFGGWTMKSEESIPAVTNDKHKRTTNEIFANEMSSLSESADIAPDMSSCVQIRQDKDKTVAQSSVALQLAYENSDNNMNLVSGDVAVSPCVSPVDPMCSVVPCSYGSDCVASQNTEHQENLNNHLGSTVQPNSGNLILNRESSPAIHRQVASLKTYSMLYPTCDPYLDKEHARVDSSSLKHNQTAKADTALTGQHKETTKVSHMVESIVPRRKRVRFSETEICYRQAKKFQKTRLKDSSVASRICRRVTRSKFKPREAKKTNKILLQDLKFLLTGFSVKKHKQIKNLIQENGGIVFDDIPSVPIRKKSFKLPLILCPKKLLTTKFLYGCAVNASILNITWLFDSVDEGLILPHKKYKVLNDHATNNRFIFEDIAIMLHGKQDFCSKMGKVVKHGGGSVFKTFHWLVKSLDSKKVSVGVIVVEDENGISRQLKQCALEQKISVMPYSWIINSLYAGRSIKAKIKATYPDAFPDNLTLESLDRRPDLNETLLL	787

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi9g01273	787	SMART	BRCT-7	663	751	IPR001357	-
	Cobi9g01273	787	SMART	BRCT-7	559	644	IPR001357	-
	Cobi9g01273	787	PANTHER	TUMOR SUPPRESSOR P53-BINDING PROTEIN 1	271	444	IPR047252	GO:0000077(PANTHER)\|GO:0005634(PANTHER)\|GO:0042393(PANTHER)\|GO:0045944(PANTHER)
	Cobi9g01273	787	ProSiteProfiles	BRCT domain profile.	557	654	IPR001357	-
	Cobi9g01273	787	Gene3D	BRCT domain	542	652	IPR036420	-
	Cobi9g01273	787	Gene3D	BRCT domain	653	763	IPR036420	-
	Cobi9g01273	787	SUPERFAMILY	BRCT domain	618	752	IPR036420	-
	Cobi9g01273	787	SUPERFAMILY	BRCT domain	548	656	IPR036420	-
	Cobi9g01273	787	Pfam	BRCT domain, a BRCA1 C-terminus domain	561	652	IPR001357	-
	Cobi9g01273	787	ProSiteProfiles	BRCT domain profile.	661	761	IPR001357	-
	Cobi9g01273	787	Pfam	BRCA1 C Terminus (BRCT) domain	665	762	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi9g01273	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr7:1454022	Cobi9g01273	Cobi-Chr9:48753080	dispersed