AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi14g00561 | ATGGAGGATGAATATGCAAAACTCATCAGGCGGATGAATCCACCAAGAGTTACAATTGATAATGATTCTTCACCTGATGCAACTGTTATACAGGTTGAAAGTGTTAATAAGCATGGTATTCTGCTGGAAGTTGTGCAAGTTCTGGCTGATTTAGATCTTGTTATTAAGAAAGCTTATATTTCATCGGATGGAGGGTGGTTCATGGATGTGTTTAATGTTACAGACCATAATGGAAGCAAAATTAGAGATGAAAGGGTGGTCAGTTATATAAAAAAGGTGCTTGAAAGTGATGCATTTTATGTACCATCACTGAACAGTTCAGTTGGATTGAAGCCATCTGATGATTACACAGTAATAGAATTAGTTGGAACAGACAGACCTGGATTATTATCTGAAGTGTCTGCAGTTCTAACAGACCTTGGATGTAATGTGGTCAATGCTGAAATATGGACCCACAATGCCAGAGCTGCAGCTGTGGTACACGTCACAGATGATAAAACAAAGTGTGCGGTTGAAGACCCAAAACGGCTCTCGACTATTAAGAAGCTTCTTTGTAATGTTCTTAAGGGAAACAATGATTTAAAGACTGCAAAAATGTCACTTTCCACCCCTGGTTTCATGCACAGGCAGAGAAGATTACATCAAATTATGTTTGCTGAGCGGGATTATGAAAAGGTTGAAAAAACAGAACAAGAAAAGGAAAATAAATTAAGAACACGGGTTACAGTTTTGGATTGTGTTGAGAAGGATTACACGGTTGTTACTATGCATTGTAGGGATAGACCGAAGCTGTTGTTTGATATTATTTGCACTCTTACTGACATGCAATATGTCGTCTTTCATGGAGTGGTTCACACCGTTAAAGCTGAGGCTTTTCAGGAATATTACATTCGACATGTTGATGGGAGCCCATTAAGCTCAGAGGCAGAACGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGGCGCTAGAGCTAGAATTGTGCACAGCAGATCGTGTTGGACTTCTTTCAGATATAACGAGAATCTTTAGAGAAAACAGTTTATGTATAAAACGAGCAGAGATTTCAACCGAAGATGGAACAGCTAAAGACAAATTTTACGTGACCGACATGACCAGTAACAACCCTGTTGACCCTAAAACCATCGATTCTATTCGAAGACAAATCGGTCAACAAGCAGCACTGCATGCTAGATGGAACTCTAGTCAGTCATCTGACCCGCAACCTGAAGAAACAACAATCGGCTTTCTGTTTGGAAATCTGTTTAAATGCCGAACATGTTAG | 1305 | 39.85 | MEDEYAKLIRRMNPPRVTIDNDSSPDATVIQVESVNKHGILLEVVQVLADLDLVIKKAYISSDGGWFMDVFNVTDHNGSKIRDERVVSYIKKVLESDAFYVPSLNSSVGLKPSDDYTVIELVGTDRPGLLSEVSAVLTDLGCNVVNAEIWTHNARAAAVVHVTDDKTKCAVEDPKRLSTIKKLLCNVLKGNNDLKTAKMSLSTPGFMHRQRRLHQIMFAERDYEKVEKTEQEKENKLRTRVTVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMQYVVFHGVVHTVKAEAFQEYYIRHVDGSPLSSEAERERVMQCLEAAIERRTSEALELELCTADRVGLLSDITRIFRENSLCIKRAEISTEDGTAKDKFYVTDMTSNNPVDPKTIDSIRRQIGQQAALHARWNSSQSSDPQPEETTIGFLFGNLFKCRTC | 434 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi14g00561 | 434 | SUPERFAMILY | ACT-like | 113 | 186 | IPR045865 | - | |
| Dapi14g00561 | 434 | SUPERFAMILY | ACT-like | 326 | 401 | IPR045865 | - | |
| Dapi14g00561 | 434 | CDD | ACT-ACR-3 | 251 | 325 | - | - | |
| Dapi14g00561 | 434 | CDD | ACT-ACR-2 | 117 | 190 | - | - | |
| Dapi14g00561 | 434 | Gene3D | - | 114 | 188 | - | - | |
| Dapi14g00561 | 434 | ProSiteProfiles | ACT domain profile. | 331 | 409 | IPR002912 | - | |
| Dapi14g00561 | 434 | Pfam | ACT domain | 28 | 78 | IPR002912 | - | |
| Dapi14g00561 | 434 | Pfam | ACT domain | 117 | 166 | IPR002912 | - | |
| Dapi14g00561 | 434 | Coils | Coil | 216 | 236 | - | - | |
| Dapi14g00561 | 434 | SUPERFAMILY | ACT-like | 24 | 95 | IPR045865 | - | |
| Dapi14g00561 | 434 | ProSiteProfiles | ACT domain profile. | 29 | 106 | IPR002912 | - | |
| Dapi14g00561 | 434 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 406 | IPR040217 | - | |
| Dapi14g00561 | 434 | ProSiteProfiles | ACT domain profile. | 118 | 199 | IPR002912 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi14g00561 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr14:10056248 | Dapi21g02418 | Dapi-Chr21:127286236 | dispersed | |
| Dapi | Dapi-Chr10:6968527 | Dapi14g00561 | Dapi-Chr14:10056248 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi14g01225 | Dapi-Chr14:27708874 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi18g03144 | Dapi-Chr18:135545338 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi26g00455 | Dapi-Chr26:6392489 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi30g00585 | Dapi-Chr30:9931670 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi30g01265 | Dapi-Chr30:27243846 | wgd | |
| Dapi | Dapi-Chr14:10056248 | Dapi8g00118 | Dapi-Chr8:2077000 | wgd |