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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01721 ATGAATTGCACAGCTTTAGGTCATGGCTCCGATGGATGTGCGTTGACCAATCCACCTGGTGCACATTTTGCCTGTCATGGCCTTACGATAGCCATTTTACTTGCGGGGTTAATGATATTATTGAGGAGTGCCACAAGGATCACGCATAAGGCTCAAGGGGTTACATGCTTGGCGGCTAAGTGGCATGTGTGTGCAACCATTGAGTCGTTTGATCCACCAGATGGAGACTCAGAAACTCCGCCCACGGATGCTGTGGGAAACCAAGTATTCCGACGTGATGCATCATCATCTGATAACGAGGCCGGGAGCGAGGATGGGTTAGACAGCACAAAACTCATACCCGCATATGCTTACAGCACCCTCTCATTCCAAAAGAGACAGGCCTTAGGTATGGCGCAACTTTTGCAATCAGTTCATCATGATCATATTAACACAATATTATTGACCTGA 450 47.56 MNCTALGHGSDGCALTNPPGAHFACHGLTIAILLAGLMILLRSATRITHKAQGVTCLAAKWHVCATIESFDPPDGDSETPPTDAVGNQVFRRDASSSDNEAGSEDGLDSTKLIPAYAYSTLSFQKRQALGMAQLLQSVHHDHINTILLT 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01721 149 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 31 130 IPR021924 -
Dapi16g01721 149 MobiDBLite consensus disorder prediction 70 106 - -
Dapi16g01721 149 MobiDBLite consensus disorder prediction 81 103 - -
Dapi16g01721 149 Pfam Protein of unknown function (DUF3537) 31 129 IPR021924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01721 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
74152 Dapi12g01523 Dapi16g01721
75726 Dapi16g01721 Dapi28g01193
381587 Dapi16g01721 Dapi23g00695
381588 Dapi16g01721 Dapi7g00683
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:54613624 Dapi17g00924 Dapi-Chr17:28631648 dispersed
Dapi Dapi-Chr16:54613624 Dapi23g00695 Dapi-Chr23:16492506 wgd
Dapi Dapi-Chr16:54613624 Dapi32g01613 Dapi-Chr32:52342163 wgd
Dapi Dapi-Chr16:54613624 Dapi7g00683 Dapi-Chr7:15524806 wgd