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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01889 ATGTGTCAACAAAAGATTGTGGTGAAGGTGAGCATGAACGGTGACAAGAAATCCCGTAAAGCTCTGCAGATCGCCGTTAGTATTTTCGGAGTTGAATCGGCGGGTTTCGTGGGATCAGATAAAGAGCAGATAGCGGTGACAGGTGCAGGTATTGACTCGGTCGAACTGACGACGTTACTAAGAAAGAAGGTTGGATACACAGAGTTGATCAGTGTTGGTCCCGTAGAGATAAAGAAAGCCGAATCGAAGGAAACAAAGCCCGCGGAGGTGACGATTCAAGTGGATCCTTACCAATACTACTATTATAACTATGGCGTGCCCTACTATTATGTTCATCAGTATTATTGA 348 44.83 MCQQKIVVKVSMNGDKKSRKALQIAVSIFGVESAGFVGSDKEQIAVTGAGIDSVELTTLLRKKVGYTELISVGPVEIKKAESKETKPAEVTIQVDPYQYYYYNYGVPYYYVHQYY 115
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01889 115 Gene3D - 1 77 - -
Dapi16g01889 115 PANTHER OS04G0464100 PROTEIN 4 90 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01889 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
381649 Dapi16g01889 Dapi23g00280
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:71115839 Dapi32g02134 Dapi-Chr32:81021372 dispersed
Dapi Dapi-Chr16:71115839 Dapi16g01890 Dapi-Chr16:71196624 tandem