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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01890 ATGGAGAAGCAAAAGATTGTGGTGAAGGTTACCATGAACAACGACAAGAAAACCCGTAAAGCTCTGAAGATTGTCGTTAGTATCTCCGGAGTTGAATATGAGGGTTTCATAGGGCTAGAAAAAGAGCAGATAGCGGTGACGGGTGCAGGTATTGACTCCGTCGAGCTGGCGTCGTTACTAAGAAAGAAGATTGGATACACAAAGCTGATAAGCATTGATCCCGTTGAGGTAAAGAAAGCGGAATCGAAGGAATCATCAAAGCCGGCGGAGGTGACAATTCAAGTGGATCCTTATGAATACTACTATTATAACTATGGCGTGCCCTACTATTATGTACATCAGTATTATTGA 351 42.74 MEKQKIVVKVTMNNDKKTRKALKIVVSISGVEYEGFIGLEKEQIAVTGAGIDSVELASLLRKKIGYTKLISIDPVEVKKAESKESSKPAEVTIQVDPYEYYYYNYGVPYYYVHQYY 116
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01890 116 Gene3D - 1 78 - -
Dapi16g01890 116 PANTHER OS04G0464100 PROTEIN 4 90 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01890 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
256720 Dapi23g00280 Dapi16g01890
381650 Dapi16g01890 Dapi23g00280
381651 Dapi16g01890 Dapi7g00255
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:71196624 Dapi32g02135 Dapi-Chr32:81043128 dispersed
Dapi Dapi-Chr16:71115839 Dapi16g01890 Dapi-Chr16:71196624 tandem
Dapi Dapi-Chr16:71196624 Dapi16g01891 Dapi-Chr16:71252782 tandem