AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01897 ATGGCGATATCCGACGGCTTCGACTACGATCTCGACTACCGCTGGAAGAAAGACGACGCCTGGTACACCTGCGGCGTCGTTCTCGAACACAAAAAGCTCCTCCGTGTCAAGTTCAGAGACTCCGTTCAGAGTTACTTCGACGAGGTTTTCTCCGTCTCCGATTTCTCCACTCACGCCGAAATCGAACAACTACTCCACAGATTCCGCCCGATCTCCCAGCCGCTGGAGGATAATGAATGTTCCAGACTGGTTCAAGGCATGAAGGTTTGCGCGATATACAGAAGAGACGACGAAGCTCTATTTTTTGACGCCATTGTTGATGCCGTGCAATATAAAGAGCATACATCTGAGGTGTGTTTATGCAGTTATTTACTGTTCTGGCAGCATGGTCCTGGTGAGGGGACTATAACAGCAACAGGCCTTGAGGACATATGTCTCATTATGCATGGTGCTGTTCATCCCAAAATTGCTGAATTCTCAAACCTTGTGAAACAACTACTTCAAAGGGCCTCTGTTCAATCACAGGCAGCGAGGGAAAGATTCTGTCTTGAATTAAGTGATCATGACATGGATATCGGAGGTGTGAAGAAAACTGACCGTCATCATTATATGGTACTGGAAAACTTGGATAAAGATCTATGCCCACTGTTAATGATGGATTTCATACACGAGCATACTTCAATCAATGCGCAGACATATGTTTTTCCAAGTTTGTTAGGAGAGTCATATGCAAGTGGAGCAATCATGGTGGATAGCAAGTCAAAACTGAAAAGGATTTATGAATTTATCAACAATCCAAATCACTTCATTACTTCCTTCTCTGGAAGGCCGTGGGTAATAGCTGAAGATAATCTTAGAACTGGAACATTCAACACAAACCTGCAGAGCTTGCAGACTAAGTATGAGAGCTACAGTTCAAAGAATGAGCTGAAGGTTGTTCGGTTAGGAACAGAAGAATATAGAAAATCTAAACAGCTAAAAGATTTATATATGGAATTTCGCAATCATCTAAAAGGTCTCGTGCAGAGGTTAGCCGCAGGGGAGAAGAACCAAGACCCATTCAGTTCTGCAAGTCGTAAAAATGCAGTTTCCAATTGCAGGTAA 1104 43.48 MAISDGFDYDLDYRWKKDDAWYTCGVVLEHKKLLRVKFRDSVQSYFDEVFSVSDFSTHAEIEQLLHRFRPISQPLEDNECSRLVQGMKVCAIYRRDDEALFFDAIVDAVQYKEHTSEVCLCSYLLFWQHGPGEGTITATGLEDICLIMHGAVHPKIAEFSNLVKQLLQRASVQSQAARERFCLELSDHDMDIGGVKKTDRHHYMVLENLDKDLCPLLMMDFIHEHTSINAQTYVFPSLLGESYASGAIMVDSKSKLKRIYEFINNPNHFITSFSGRPWVIAEDNLRTGTFNTNLQSLQTKYESYSSKNELKVVRLGTEEYRKSKQLKDLYMEFRNHLKGLVQRLAAGEKNQDPFSSASRKNAVSNCR 367
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01897 367 Gene3D - 75 146 - -
Dapi16g01897 367 PANTHER SAWADEE PROTEIN 8 349 - -
Dapi16g01897 367 Pfam SAWADEE domain 8 145 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01897 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
381656 Dapi16g01897 Dapi7g00235
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:71600609 Dapi32g02143 Dapi-Chr32:81535251 dispersed
Dapi Dapi-Chr16:71525135 Dapi16g01897 Dapi-Chr16:71600609 proximal