AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01900 ATGCAGCAGACAGATCCTTCCATGAAATATGGTACTAACGGTCGACCTTCAAAGGTTGATACAAATGGTCAACCTGTGAAGTTAGGTGCCAATGGTAAACCAGTGAGTTTGGGTACCAATGGTCAGCCTGTGAAGTTGGGAATGAAAGGTCAACCAATCACCATGGTTCCCACCAGTGAGGTGGTGAACAATAAGCCTTTATCTAAACAAAGAGCTGGAATAATAAATGGATCAACACAAAGTGTTAATGGAACAGGTCTTGTTAAGAGAGAAATCACACCGCCACTAGCTAAGTCTGTCAAAGTTAAAGAAGTCACGGGATTCCCTCCTTCTGAAGAGTTACGGGTCTTGCCATCAGATGAAAGTTTTAGTTGGGCAAATGATAATTATAATTCAGTACAAAGGTCAATAGATGTGTGGTCTTTTGTTCTTTCTTTGCGTGTGCGTGTTCTGTTTGACAATGCAAAGTGGGCATATCCTGGTGGCTTCACAGAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAATGTGTGCTTCAACTTGGCCCAACTTTTATTAAACTTGGGCAGTTATCTTCAACAAGGTCAGATTTATTTCCACGTGAATTTGTTGATGAACTCTCCAAATTACAGGACAGAGTACCAGCCTTTTCACCAGCAAAAGCAAAAGCTTTTATTGAAAAAGAATTGGGAGCTCCAGTTAATGTACTCTTCAGGGAGTTTGAAGAACGACCAATAGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATACTACATAATGGAGAGAAAGTAGTTATTAAAGTTCAAAGACCTGGCCTGAAGAAACTGTTTGACATCGATTTAAAAAATTTAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGAGGCCCCACAAGGGACTGGATAGGTATCTATGATGAATGTGCAAAGATCTTGTACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCAGATAGATTTCGCCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAGATAAATAACATAGATGCGATACAAGAAAGGGGTTTCAGTCGATCCCAAATCTCTTCACGTGCCATTGAATCATACTTGATTCAGATACTGAAAACTGGTTTCTTTCATGCTGATCCTCATCCTGGAAATCTTGCTATTGATGTGGATGAGTCACTAATCTACTATGATTTTGGTATGATGGGGGAGATTAAATCATTCACAAGAGAAAGATTGATGGATCTTTTTTATGCAGTTTACGAAAATGATGCAAAAAAGGTTATGAACAGTTTGATAAGCCTTGAAGCACTTCAACCTACTGGAGACTTGTCACCAGTAAGGAGATCTATTCAGTTCTTTTTGGATAATTTGCTAAATCAGTCACCAGATCAGGAGCAAACTTTGGCTGCAATAGGCGAGGATTTGTTTTCTATAGCAACAGATCAGCCTTTCCGGTTCCCATCCACCTTCACATTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTGGATCCAGATTTTTCATTTGTCAAGATTGCAGCACCTTATGCACAGGAGCTGCTAGATCTGAAACAACAACGGCCCAGTGGAACACAACTTGTTGCCGAAATACGAAAACAAGCCGATGATGCAAGATCAAACACCATGTCAATGCCTAACAGAGTTCAAAGGATTGAAGAGTTTGTTAAACAACTAGAAGTAGGGGACATTAAACTTCGTGTCAGAGTTCTCGAGTCTGAGAGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCATGTACACAGTTATAGGGGGCACCCTTGTAAATATTGGTGTCACACTTAGCTCACAAGGCAGCCAACTTATAGCAAATGGGTCATTTGTTGGTGCAGGTATATTCATAGCACTGCTGATTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAATTTGAAAAAATGATATGA 2052 40.11 MQQTDPSMKYGTNGRPSKVDTNGQPVKLGANGKPVSLGTNGQPVKLGMKGQPITMVPTSEVVNNKPLSKQRAGIINGSTQSVNGTGLVKREITPPLAKSVKVKEVTGFPPSEELRVLPSDESFSWANDNYNSVQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEEKQKNRRRKTASWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELSKLQDRVPAFSPAKAKAFIEKELGAPVNVLFREFEERPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLKNLKLVAEYFQRSETLGGPTRDWIGIYDECAKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNIDAIQERGFSRSQISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYENDAKKVMNSLISLEALQPTGDLSPVRRSIQFFLDNLLNQSPDQEQTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRPSGTQLVAEIRKQADDARSNTMSMPNRVQRIEEFVKQLEVGDIKLRVRVLESERAARKATILQMATMYTVIGGTLVNIGVTLSSQGSQLIANGSFVGAGIFIALLIRSMQRVKKLDKFEKMI 683
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01900 683 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 117 612 IPR050154 GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER)
Dapi16g01900 683 SUPERFAMILY Protein kinase-like (PK-like) 216 464 IPR011009 -
Dapi16g01900 683 Pfam ABC1 atypical kinase-like domain 214 460 IPR004147 -
Dapi16g01900 683 MobiDBLite consensus disorder prediction 1 20 - -
Dapi16g01900 683 MobiDBLite consensus disorder prediction 1 41 - -
Dapi16g01900 683 CDD ABC1-ADCK3-like 214 461 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01900 K03688 ubiquinone biosynthesis protein
Dapi16g01900 K08869 aarF domain-containing kinase
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr15:21496937 Dapi16g01900 Dapi-Chr16:71779345 dispersed
Dapi Dapi-Chr16:71779345 Dapi31g01219 Dapi-Chr31:31409893 dispersed
Dapi Dapi-Chr16:71779345 Dapi23g00252 Dapi-Chr23:5225384 wgd
Dapi Dapi-Chr16:71779345 Dapi32g02147 Dapi-Chr32:81673632 wgd
Dapi Dapi-Chr16:71779345 Dapi7g00232 Dapi-Chr7:4686961 wgd