Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi16g01987 | ATGATTAAGCAAATATTAAACAAACTTCCGAGGAAATCATCCTCCAAATCACATCACAACGATGAACGAAACAACGAATTGGATTTCTCCGTTATTAATTCCAAGGCCAATTCATCGTCTGACAAAACCCCCAAATTGAGTTCTTCCAATAATAATGAAACCCCCAAATTACTACCACCTGCTTCTTATGAAGCATTACCTAGCTTCCGAGGCGTGTCGAGTTCCGAAAAACATAATCTTTTCATCAAAAAGGTGAACATGTGTTGTGTGGTGTTCGATTTCAACGATCCCGCGAAGAACATAAAGGAAAAAGAAGTAAAGAAACAAACTTTACTCGAACTAGTCGATTATGTTTCCTCGGTCACATCGAAATTCAACGAGATTACAATTCAAGAAATCGCGAAAATGGTAGCGTGTAATTTGTTTCGGGCTTTGCCTAATTTGAATCAAGAAAGTAAACTATTGGATGCTTATGATCAAGAAGATGATGAGTTTTGTATGGATCCGTCGTGGCCGCATCTTCAAGTGGTGTATGAGTTCCTTCTTAGGTTTGTGGCTTCGCCCGAAACTAATGCGAAGGTTACTAAACGGTACATTGATCATTCTTTCGTGTTAAAGTTGCTTGATTTGTTTGATTCGGAAGATCAACGGGAACGTGAGTATTTGAAAACAATCTTGCATAGAATATATGGAAAGTTCATGGTTCATCGCCCGTTTATTAGGAAAGCTATTAATAATATCTTTTATCGTTTTATGTTTGAGACGGAGAAACATAATGGGATAGCCCAGTTGCTTGAGGTTTTGGGGAGTATAGTTAATGGGTTTGCTTTGCCTTTGAAGGATGAGCATAAGGCTTTTCTTGTTCATGTGTTGATCCCGCTTCATAAGCCTAGATGTTTGTCGATGTATCACCAGCAGCTTGTGTATTGTGTGTGTCAGTTTGTTGAAAAAGATTGTAAATTGGCGGATACTGTTGTTCGGGGATTGTTAAAGTATTGGCCTGTGACTAATAGTTCGAAAGAGGTTATGTTTCTTGGTGAATTGGAGGAGGTTCTTGAAGTTACACAAGCTGCAGAGTTTGAGAAGTTTATGGCCCCTTTGTTTAGTCGGATCGGTCAATGCCTCAACAGTTCACATTTTCAGGTGGCAGAACGCGCATTGTTTTTGTGGAATAACGAGCATATAAGGAATCTAACAACTCAAAACCGCAAAGCGATTCTGCCTATTATTTTCTCCCCATTGGAGAAAAACACATGCGGTCATTGGAACCAAGCTGTTCAAAGCCTAACCTTAAATGTCAGAAAAGTATTCTCGGATGCCGATCAGTCAACGTTCCAAGAATGTCTGGTCAGGTACCAAGAAGATGAAACCAAAGAGAAAGAAAGCATTACGACAGTCAACATGGGACCGCGTAGATGCCATGGCATTGGCAGCCTCCAAAACCCAGACTATTATCATCACCACCGCTGCCACCGCCACCAAAAAATTATGATTTTGGAAGGTTGGGATAGAAACTAA | 1518 | 40.12 | MIKQILNKLPRKSSSKSHHNDERNNELDFSVINSKANSSSDKTPKLSSSNNNETPKLLPPASYEALPSFRGVSSSEKHNLFIKKVNMCCVVFDFNDPAKNIKEKEVKKQTLLELVDYVSSVTSKFNEITIQEIAKMVACNLFRALPNLNQESKLLDAYDQEDDEFCMDPSWPHLQVVYEFLLRFVASPETNAKVTKRYIDHSFVLKLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFMFETEKHNGIAQLLEVLGSIVNGFALPLKDEHKAFLVHVLIPLHKPRCLSMYHQQLVYCVCQFVEKDCKLADTVVRGLLKYWPVTNSSKEVMFLGELEEVLEVTQAAEFEKFMAPLFSRIGQCLNSSHFQVAERALFLWNNEHIRNLTTQNRKAILPIIFSPLEKNTCGHWNQAVQSLTLNVRKVFSDADQSTFQECLVRYQEDETKEKESITTVNMGPRRCHGIGSLQNPDYYHHHRCHRHQKIMILEGWDRN | 505 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi16g01987 | 505 | PANTHER | SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B | 1 | 462 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Dapi16g01987 | 505 | MobiDBLite | consensus disorder prediction | 1 | 59 | - | - | |
| Dapi16g01987 | 505 | Pfam | Protein phosphatase 2A regulatory B subunit (B56 family) | 66 | 463 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Dapi16g01987 | 505 | SUPERFAMILY | ARM repeat | 78 | 460 | IPR016024 | - | |
| Dapi16g01987 | 505 | PIRSF | PP2A-B56 | 3 | 473 | IPR002554 | GO:0000159(InterPro)|GO:0007165(InterPro)|GO:0019888(InterPro) | |
| Dapi16g01987 | 505 | Gene3D | - | 74 | 467 | IPR011989 | - | |
| Dapi16g01987 | 505 | MobiDBLite | consensus disorder prediction | 14 | 28 | - | - | |
| Dapi16g01987 | 505 | FunFam | Serine-threonine protein phosphatase 2A regulatory subunit | 73 | 473 | - | - | |
| Dapi16g01987 | 505 | MobiDBLite | consensus disorder prediction | 29 | 57 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi16g01987 | K11584 | serine/threonine-protein phosphatase 2A regulatory subunit B' |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr16:77313680 | Dapi31g00763 | Dapi-Chr31:14343998 | dispersed | |
| Dapi | Dapi-Chr12:93673367 | Dapi16g01987 | Dapi-Chr16:77313680 | wgd | |
| Dapi | Dapi-Chr16:77313680 | Dapi28g01185 | Dapi-Chr28:88396892 | wgd |