AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01990 ATGGCTGAAATTCTAAGCCCTAATCGTACACCGGGACACAAACAGAGAGCGTCGGTCTTGTCGCCGGACCGAACTTTGTTTTTGGGCTCGAACGATGATAAACTCGAGCGTGCTCAAGCACGCGCCGCCCGTGCTGCAGCGAACCGCCGGAAAGCTGCCGCATTTCCTCAAGCAACTGATGCTGCTCCTGCCGATCCGTATCTAGGTCAAGAGCAGATTATGGAAATGTTACATAATTGCATCAAATTGGCCAGTGAAAATAAAATTAATCAGAAGAATACGTGGGAGCTGAATCTGATAGATCATCTTTGCGATATTATTAAGGTTGAAGAAGAGAATGATGCAGAGACCAATTTTCAGAAGGCAAGCTGTACTCTTGAAGCTGGAGTTAGAATATATTCAATGAGGGTGGATTCAGTACATTCAGAGGCATATAAAGTTCTTGGAGGGATTAGTCGAGTTGCACAGGATGCTGAACAAGATACGGTGCAGGATGGCAATACAGACGATATGCATGTAGAAGGCACTTCAAAGAAGGAGAAGGAACACAAGTTATCTCCTTTAACAACATTGGAATCATCCTTTGAGGCTCTTAATGTAAAGAAGTTTGATGTTGCATTTGCTGTCGATCCTCTTTATCATCAAACAACTGCCCAGTTTGATGAAGGTGGTTCAAAGGGTCTTTTGCTGAATAATCTTGGTGTTTATGGTGGATGCCGAATGGTTTTTGATTCACTTGAAGTACCTGGGAAGTGCATGTCATGCTCAAGTGACCATGATAAAACAAATACTATCGATATTTCTCATGCCAAAGACAGTATCGAACAAATGGTATCAAATTTCGTAAAGAAACTTGAAATCTCCCCAAGTCTTAAGGACATAGTCAATCTGTTTGATGAAGATTGTAAAAGACCAGCAGATACTTTTTCTTCTTCCCAAAAATCTGTAGAACCAGATAATGAAGCTTGTGATGACAATGGATTTAATGATGGTGGACTTGATAACTCAGAAACCTGGGACTACATTAATGATAACCAAACAAATGTGAATGATGAGGGAACCTATGAAGACGAGGATGATCTTTTTGTTCCAGTTCATCATGAGGAAAACGGGCCGTATGTTTCTCATGATGGTGATATGGATGACAGATCTACAACAGTTGACAGCTTCTTGTTTCTAAGCCTTGGCTTAACTGGAAAACAAAATGCTTGGGCAGGCCCTGATCACTGGAAGTATCGAAAGACTAAAGGTTTAGAAGATCCTGCTAAGGAAACTGGATCACCAAAAATGCCTAAAAGAAATAAGAAACAAGCTGAGCCTGATATAGAGTTTACTAAATCCTTAGACTTGGATAAGGAAATGTGTAGTATCTTTGCTCCCCCAAAAAACCCTAAAACTCTATTATTGCCTGCAAGTAGGGAACCGTGTAACACAACACTTCCGGAGGATTGCCATTATCAACCAGAAGATCTTGTCAAGATATTTCTTCTTCCAAATGTTATGTGCCTTGGGAAGAAAGCAAAGAGGTATTCTGATGAAAATGGTCAACAAGGCGAAAATAATAACGAAGCGTTTACATCTTGGGATGATGAATGTGGCCATTTTGACGATGGAAATACCTATAACAGTGATGTTGAGGACTCTACTACACTTGTCTCTCAGCCCCGTCAGGTAAATAAGATTGAAGTTGAATATGATAAAACATCTAAACAAGTTGATGTTCAGGCACTCAAAGAGACTCTTTGGTCATCTATGCAAGAAACACAGGAAACAAAGACATTGTCTTTTAAGCACTTGCTAACAACTTTCCCGACCGATAAAAAGAAACCAGCCGCTGCATCTATTGATACTATCTCCCCACATTTGTGTTTCATTTGCGTGTTGCATTTGGCTAACGAGCACGGTTTAAGCATAATCGGATGTGGTGACTTGGATGACCTCACAATAAACTTACCTGCATAA 1962 40.62 MAEILSPNRTPGHKQRASVLSPDRTLFLGSNDDKLERAQARAARAAANRRKAAAFPQATDAAPADPYLGQEQIMEMLHNCIKLASENKINQKNTWELNLIDHLCDIIKVEEENDAETNFQKASCTLEAGVRIYSMRVDSVHSEAYKVLGGISRVAQDAEQDTVQDGNTDDMHVEGTSKKEKEHKLSPLTTLESSFEALNVKKFDVAFAVDPLYHQTTAQFDEGGSKGLLLNNLGVYGGCRMVFDSLEVPGKCMSCSSDHDKTNTIDISHAKDSIEQMVSNFVKKLEISPSLKDIVNLFDEDCKRPADTFSSSQKSVEPDNEACDDNGFNDGGLDNSETWDYINDNQTNVNDEGTYEDEDDLFVPVHHEENGPYVSHDGDMDDRSTTVDSFLFLSLGLTGKQNAWAGPDHWKYRKTKGLEDPAKETGSPKMPKRNKKQAEPDIEFTKSLDLDKEMCSIFAPPKNPKTLLLPASREPCNTTLPEDCHYQPEDLVKIFLLPNVMCLGKKAKRYSDENGQQGENNNEAFTSWDDECGHFDDGNTYNSDVEDSTTLVSQPRQVNKIEVEYDKTSKQVDVQALKETLWSSMQETQETKTLSFKHLLTTFPTDKKKPAAASIDTISPHLCFICVLHLANEHGLSIIGCGDLDDLTINLPA 653
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01990 653 MobiDBLite consensus disorder prediction 165 182 - -
Dapi16g01990 653 MobiDBLite consensus disorder prediction 416 438 - -
Dapi16g01990 653 Pfam Condensin complex subunit 2 28 518 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Dapi16g01990 653 Pfam Condensin complex subunit 2 530 650 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Dapi16g01990 653 PIRSF Condensin-H 5 548 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Dapi16g01990 653 PIRSF Condensin-H 530 653 IPR022816 GO:0000796(InterPro)|GO:0007076(InterPro)
Dapi16g01990 653 PANTHER CONDENSIN COMPLEX SUBUNIT 2 21 651 IPR022816 GO:0000796(InterPro)|GO:0000799(PANTHER)|GO:0003682(PANTHER)|GO:0007076(PANTHER)|GO:0007076(InterPro)
Dapi16g01990 653 MobiDBLite consensus disorder prediction 158 182 - -
Dapi16g01990 653 MobiDBLite consensus disorder prediction 308 329 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01990 K06676 condensin complex subunit 2