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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g01992 ATGGCATTGAACAGGGGTGCATCCTGTAACCCTGCCGTGGTGAAGGTCGGAATTATATTTCTAGGAGTGTGTTTGGTTGGTTATTTAGTGGGCCCACCTTTATACTGGCATATTCTTGAAGGATTCGCCGCCTCTTCCTCCGTCTCCTGCCCTGCCTGCAACTGCGACTGCGACTCTCAGCCCCTTCTCTCCATTCCTCAAGCGCTAAGCAACGGTTCTCTCACAGATTGTGCAAAGCATGATCCTGAAGTGAACGGAGAAACCGAAAAGAATTTTGCCGAGCTTTTATCAGAAGAACTAAAGCTGCGAGAAGCCGAAGCTTTAGAAAGCCAACAACGTGCTGACATGGCACTTCTCGAGGCGAAGAAGCTAACATCACAGTACCAGAAAGAAGCCGACAAGTGTAACTCAGGGATGGAAACATGTGAAGAAGCCCGTGAAAAGGCCGAAGCAGCTCTAATTGCACAAAAACGCGAAAGTGAAAAGTGGGAATCGAGGGCCCGACAACGAGGGTGGAAAGATGGCGGCAATAAGGCGGTAAACACCGCGTGA 552 49.82 MALNRGASCNPAVVKVGIIFLGVCLVGYLVGPPLYWHILEGFAASSSVSCPACNCDCDSQPLLSIPQALSNGSLTDCAKHDPEVNGETEKNFAELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALIAQKRESEKWESRARQRGWKDGGNKAVNTA 183
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g01992 183 Coils Coil 102 122 - -
Dapi16g01992 183 MobiDBLite consensus disorder prediction 155 183 - -
Dapi16g01992 183 Pfam Protein of unknown function (DUF1068) 12 174 IPR010471 -
Dapi16g01992 183 Coils Coil 139 166 - -
Dapi16g01992 183 PANTHER EXPRESSED PROTEIN 1 178 - -
Dapi16g01992 183 MobiDBLite consensus disorder prediction 155 173 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g01992 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
74003 Dapi12g01256 Dapi16g01992
75751 Dapi16g01992 Dapi28g01182
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:77654925 Dapi32g01305 Dapi-Chr32:26513099 dispersed
Dapi Dapi-Chr12:93652757 Dapi16g01992 Dapi-Chr16:77654925 wgd
Dapi Dapi-Chr16:77654925 Dapi28g01182 Dapi-Chr28:88382951 wgd