AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g02058 ATGGCTTCCTCTTCATCCAGCTGGAGCCTCATCTTCTATGCTCTATTGCTTATACAGATTTGTGGTGGTCGGGAAATCATGGACAAGAACCAAAAGATCGGTCACACCGAACAAAATCATATAAACATTTACCCGAAAAACGATCTTAACGAGTTGGATCCGGCTCTAAACGTGTTCTTCCACATAACCGATTTATATTCGGGCAAAAAAATGCCAATTTATTTCGCGGTCAACGATCCTTCAACAACTCCTCGGTTATTAACACGAGAACAATCCGAGTCGATACCGTTTTCATCGTCAAAACTTTCGTATCTTCTCAAACTCATATCGCTAGCTGACGGTTCACCACAAGCCCTAGCCATGGAGCAAACACTTAAACAGTGTGAGCTTGAGGCGACACCGGGTGAGACCCGGTTTTGTGCTAGCTCGTTAGAGTCCGTGCTGGACTTGACACGTGGCATATTGGGTATGGTCAACCTGAAAGCGTTGACCACCAATATCCACAATATGTCAAATACCCTTTTGCAAGGGTATACTTTTTTGAAAGAGCCTTTGGAGATTAATGTTTCTGATATGGTGGCTTGTCACACCATGGCTTATCCTTATGCGGTTTATTATTGTCATGGTCAAAAGGGGTACAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATATAGTTGATGCTATCGCGGTTTGCCACATGGACACGACTAATTGGGATAGCGATCACGTGGCGTTTCGTGTGCTCGGAGGCCAACCTGGCAGCTCGCCGGTGTGCCATTTTCTCCCCGCCGATAACATCGTGTGGATTCCGTCACCGTAG 831 45.37 MASSSSSWSLIFYALLLIQICGGREIMDKNQKIGHTEQNHINIYPKNDLNELDPALNVFFHITDLYSGKKMPIYFAVNDPSTTPRLLTREQSESIPFSSSKLSYLLKLISLADGSPQALAMEQTLKQCELEATPGETRFCASSLESVLDLTRGILGMVNLKALTTNIHNMSNTLLQGYTFLKEPLEINVSDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTTNWDSDHVAFRVLGGQPGSSPVCHFLPADNIVWIPSP 276
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g02058 276 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 42 275 IPR044816 -
Dapi16g02058 276 Pfam BURP domain 58 273 IPR004873 -
Dapi16g02058 276 ProSiteProfiles BURP domain profile. 59 275 IPR004873 -
Dapi16g02058 276 SMART BURP-2 57 275 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g02058 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:81511140 Dapi23g00167 Dapi-Chr23:3667807 dispersed
Dapi Dapi-Chr16:81511140 Dapi28g01125 Dapi-Chr28:86661592 transposed