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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi16g02059 ATGCCGAGCGAGGTTGGTCTGCGGTTGCTTCTTTGCCCACTTGGTTCCAATATTGTCCTAAAAACAGCATGCTGTTCTGTAGGAGTTATTTTACCTGTTTACTCTACTTTTAAAGCAATTGAGACAAATAATAGAGCTGAGCAACATAAGTTGCTTTTATACTGGGCAGCATATGGAACATTTAGCATTGCAGAAATATTTGCCGACAAAATTATATCCTGGTTTCCACTTTACCATCACATGAAGTTTGCTTTTCTTGTTTGGCTTCAGCTTCCGACTACCAATGGTGCAAAACAGTTATACATGAATTATTTACGTCCTTTCCTTTTGAAGCATCAATCTAACCTTGATCAAATTGTGGCATTGTTGTACAGTGAAACGGGTAAATTTGTTAGTGCTCACCAAGGAGAATTCCGGTTCCTGAAAGCAATTGTGGTGAAAATTCTGATATCAGCAAAGCATTTGGTCAATGATAGCAGTCAACCCAACCCGCCAGTCCCGCCTCCAGAGGGAAGAGCAATCACAGGTCTAAATGAACAAGTAGAGAGCACTGCGCCTAATGACAATGATGATAATATTAATAGTGGCGACGATGATGACGACGATGGTTATGTAACTGTTCCTGCAAGTTAA 633 40.44 MPSEVGLRLLLCPLGSNIVLKTACCSVGVILPVYSTFKAIETNNRAEQHKLLLYWAAYGTFSIAEIFADKIISWFPLYHHMKFAFLVWLQLPTTNGAKQLYMNYLRPFLLKHQSNLDQIVALLYSETGKFVSAHQGEFRFLKAIVVKILISAKHLVNDSSQPNPPVPPPEGRAITGLNEQVESTAPNDNDDNINSGDDDDDDGYVTVPAS 210
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi16g02059 210 PANTHER HVA22-LIKE PROTEINS 28 129 IPR004345 -
Dapi16g02059 210 MobiDBLite consensus disorder prediction 158 210 - -
Dapi16g02059 210 Pfam TB2-DP1, HVA22 family 32 108 IPR004345 -
Dapi16g02059 210 MobiDBLite consensus disorder prediction 177 191 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi16g02059 K17279 receptor expression-enhancing protein 5/6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:81544504 Dapi29g02366 Dapi-Chr29:92535174 dispersed
Dapi Dapi-Chr16:81544504 Dapi28g01118 Dapi-Chr28:86098777 transposed
Dapi Dapi-Chr16:81544504 Dapi12g01188 Dapi-Chr12:91448102 transposed