AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi18g02903 | ATGGCTCATATGGAATCAAACAGAGGGGAGGTGAGAATTCTTGAAAGTTTGGATGAACTCAGCACGGATTTGGCTGATTATATAGCAGAGTTATCCGAGGCATCGGTTAAAGAACGAGGCTTTTTCGCCATTGCTTTGTCTGGTGGCTCAATTATTAGCTTGATGAGGAATCTGTGTGGAGCTCCTTATAACAAGACTGTTGATTGGTCAAAATGGTATATATTTTGGGCAGATGAACGAGTGGTTGCCAAGAATCATGTTGATAGCAACTATAAGCTTGCTAAAGATCATCTTTTGTCTAAGTTGCCTATTGTTCCAAGCCATGTGTATTCCATCAATGATTCTCTGACTGCAGAAGAAGCTGCTACCGAATACGAGTTTGTGATCAGGCAACTGGTCAGGACCCGTGTGGTGAACGTGTCTGAGGTCAGCGACTGCCCGAAGTTTGACTTAATCCTTCTAGGGATGGGCCCGGATGGTCACGTGGCGTCTTTGTTTCCCAATCATTCGGTTCTTGAAGAAAAGAATGAATGGGTGACATTTATCACCACTTCCCCTAAGCCCCCGCCCGAAAGAATCACCTTCACGCTGCCTGTTATCAACTCGGCTGCCAATGTGGCGGTGGTGGTGACAGGTGGCGGGAAAGCGGAAGCTTCGCGGCTGGTGATAGATGATGTGGGACCCGAGTGTCCGGTGTTGCCAGCTAGGATGATTGAGCCAGTTGTAGGGAAACTGGTGTGGTTTTTGGATAATCAGGCTGCTTCAAAGCTAAAGGGCTTTTCTAAATTTTGTAAGTAG | 798 | 46.62 | MAHMESNRGEVRILESLDELSTDLADYIAELSEASVKERGFFAIALSGGSIISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPIVPSHVYSINDSLTAEEAATEYEFVIRQLVRTRVVNVSEVSDCPKFDLILLGMGPDGHVASLFPNHSVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKAEASRLVIDDVGPECPVLPARMIEPVVGKLVWFLDNQAASKLKGFSKFCK | 265 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi18g02903 | 265 | Gene3D | - | 6 | 260 | - | - | |
| Dapi18g02903 | 265 | CDD | 6PGL | 18 | 249 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Dapi18g02903 | 265 | Coils | Coil | 17 | 37 | - | - | |
| Dapi18g02903 | 265 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 17 | 247 | IPR006148 | GO:0005975(InterPro) | |
| Dapi18g02903 | 265 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 11 | 258 | IPR037171 | - | |
| Dapi18g02903 | 265 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 5 | 258 | IPR039104 | - | |
| Dapi18g02903 | 265 | FunFam | Probable 6-phosphogluconolactonase | 6 | 258 | - | - | |
| Dapi18g02903 | 265 | NCBIfam | 6-phosphogluconolactonase | 14 | 257 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi18g02903 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 76895 | Dapi18g02903 | Dapi21g00164 | |
| 76896 | Dapi18g02903 | Dapi5g00120 | |
| 257384 | Dapi18g02903 | Dapi2g03728 | |
| 382954 | Dapi18g02903 | Dapi24g00165 | |
| 382955 | Dapi18g02903 | Dapi8g00213 | |
| 382956 | Dapi18g02903 | Dapi8g00302 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1906277 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi2g02656 | Dapi-Chr2:103943723 | |
| 2011564 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi18g03025 | Dapi-Chr18:133521660 | |
| 2012568 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi2g03728 | Dapi-Chr2:141306067 | |
| 2014033 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi21g00164 | Dapi-Chr21:3441262 | |
| 2014883 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi24g00165 | Dapi-Chr24:2299955 | |
| 2015903 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi5g00120 | Dapi-Chr5:2722713 | |
| 2016660 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi8g00302 | Dapi-Chr8:5413081 | |
| 2016856 | Dapi | Dapi18g02903 | Dapi-Chr18:131247404 | Dapi8g00213 | Dapi-Chr8:3671496 |