Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi20g01444 | ATGGATCAACAGCATATACTCTATGATGAAGTCATAGTGAACGGCGGCAAGACATCATTGACTTTGTCCACCGACGGCACACTGCGGTGGCATGATAACGACGACGCCCTCCGTTGCCTCTCCGTCGACAGAGAAGTTCTCGGAGTATCGGTTATTGGAAACCAGATCATAATTAGGTCATTTATTGAGATTGACGGATCTTGCTTTGGATGTTTTGGAGGAAGTTTGGTACGGAAGAGCTTCCTGTTCGAGGCATCGTCAGAGGATTCATTGCGGAATTTGTGCGACAAGATTCAGGGATACATTGATTCCCTTGCCAGGCCAAAGAAGCTGTTTATATTTGTTAACCCATTTGGAGGTAGGAAGTCTGCTTCCAAGGTTTTTAGCAATGATGTAAAACCTGTACTCGAGGATGCCAATATAGAATATACTTTACAAGAAACTAAATATCAGCTTCATGCTAAGGAAGTTTCTCATAATTTGGATCTTACAAAGTATGATGGCATTCTTTGTGTTAGCGGTGACGGGATATTGGTCGAGGTTGTTAATGGATTGCTTGAAAGAGAAGACTGGCAAGCAGCACTTAAGATGGCTGTTGGTGTTGTACCTGCAGGTACTGGAAATGGAATGATAAAATCTCTTCTCGATTCAGCTGGTCAACCATGTACAGCTGCTCATGCCATGCTTGCTGTTATTCGAGGGCATAAACGCTCTCTGGATGTAGCCACAATCTGGCAAGGGGAGGCTAGATTTTTTAGTGTCTTGATGCTTGCATGGGGATTGATAGCCGATATAGATATTGAGTCTGAGCAGTATCGGTGGATGGGTAGTGCTCGGATGGATTTATATGGTCTACAACGAATTCTAAGACTGCGGAAATATAACGGCTGTATTTCTTTTGTACCTGCTCCTGGATTTGAAGATGTAGGAGAACCAACCAGTGTTGCTGTTGAACCTCTTGAAACTCAGCATCATGGTTACCAGGGCCCTAAGCTTGATTTGGGGAGTTGGAGAAAGCTTAATGGTCCGTTTATTGGTATTTGGCTTCAGAATGTTTCTTGGGGTTCTGAAAATGCCATGGCCGCACCCGATGCTAAGTTTGATGATGGTTATCTAGACTTGATTGTAATGCGAGAATGCCCAAAGTTAAGGTTGATATCCTTGATGTCTGAAATGAGCAATGGGCGTTATGTAAGATCCCCACATGTTTTGTATACTAAGGTGAAGGCAGTGATCTTGGAGCCTGGTTCCAGGACGGGTGACTCAACTATTGAAGGAATTATAGATTCTGATGGGGAAGTCTTGGCAAGAGGCAAAGGAACGTACAAGTGCCACTTAAACTCGTTGATGTGTTATGATAAGCTGCAAATCGTCGTTGATCAAGGGTTGGCTACTTTGTTTACTCCAATTTAA | 1413 | 43.45 | MDQQHILYDEVIVNGGKTSLTLSTDGTLRWHDNDDALRCLSVDREVLGVSVIGNQIIIRSFIEIDGSCFGCFGGSLVRKSFLFEASSEDSLRNLCDKIQGYIDSLARPKKLFIFVNPFGGRKSASKVFSNDVKPVLEDANIEYTLQETKYQLHAKEVSHNLDLTKYDGILCVSGDGILVEVVNGLLEREDWQAALKMAVGVVPAGTGNGMIKSLLDSAGQPCTAAHAMLAVIRGHKRSLDVATIWQGEARFFSVLMLAWGLIADIDIESEQYRWMGSARMDLYGLQRILRLRKYNGCISFVPAPGFEDVGEPTSVAVEPLETQHHGYQGPKLDLGSWRKLNGPFIGIWLQNVSWGSENAMAAPDAKFDDGYLDLIVMRECPKLRLISLMSEMSNGRYVRSPHVLYTKVKAVILEPGSRTGDSTIEGIIDSDGEVLARGKGTYKCHLNSLMCYDKLQIVVDQGLATLFTPI | 470 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi20g01444 | 470 | ProSiteProfiles | DAG-kinase catalytic (DAGKc) domain profile. | 106 | 248 | IPR001206 | GO:0016301(InterPro) | |
| Dapi20g01444 | 470 | Gene3D | - | 91 | 239 | IPR017438 | - | |
| Dapi20g01444 | 470 | SMART | dagk-c4a-7 | 110 | 245 | IPR001206 | GO:0016301(InterPro) | |
| Dapi20g01444 | 470 | FunFam | Sphingosine kinase 2 | 94 | 239 | - | - | |
| Dapi20g01444 | 470 | Gene3D | - | 241 | 451 | - | - | |
| Dapi20g01444 | 470 | Pfam | Diacylglycerol kinase catalytic domain | 110 | 243 | IPR001206 | GO:0016301(InterPro) | |
| Dapi20g01444 | 470 | Pfam | YegS C-terminal NAD kinase beta sandwich-like domain | 357 | 438 | IPR045540 | - | |
| Dapi20g01444 | 470 | SUPERFAMILY | NAD kinase-diacylglycerol kinase-like | 107 | 449 | IPR016064 | - | |
| Dapi20g01444 | 470 | PANTHER | SPHINGOSINE KINASE | 76 | 438 | IPR050187 | GO:0001727(PANTHER)|GO:0005737(PANTHER)|GO:0006665(PANTHER)|GO:0016020(PANTHER)|GO:0016310(PANTHER)|GO:0043231(PANTHER)|GO:0046512(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi20g01444 | K04718 | sphingosine kinase [EC:2.7.1.91] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:81832882 | Dapi20g01444 | Dapi-Chr20:82553583 | dispersed | |
| Dapi | Dapi-Chr20:82553583 | Dapi21g01730 | Dapi-Chr21:112477240 | dispersed | |
| Dapi | Dapi-Chr20:82553583 | Dapi4g01538 | Dapi-Chr4:91077483 | wgd |