AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01459 ATGAAAGAAGCTAAATCATTGAGGAATCTATTGAAAAGACACCTCCATTTTGATTGGGGACGTTATGGAATGAAGATGAAACCGTTCATGGGAGTTGCATTTATCATAATGCTGTATATTGTGTATAGAACCACAAATTATCAGTATCTCCAAACGGAGCTGGACTCAAGATTGGATCCACTCTATTCAACGAAGGACTATGCCATAGCCTCTGTCAATTTAAAAGGTTTACCTCGCGGTATTATTGAAACTAAATCTGACTTGGAATTAAAGCCTTTATGGTCAACAAGTAGTTCAAAGTCGAAGGGTGATATTTCCAGTACACATAATTTGCTGGCTGTTCCAGTGGGTCTCAAACAAAAGCGTAATGTTAATACCATTGTCCAAAAGTTTCTCAAAGAAAATTTTACAGTTATCTTGTTCCATTACGATGGAAAGGTCGATGGCTGGCGGGATCTTGATTGGCATAACAGTGTCATACATATTGTAGCTCAGAACCAAACAAAGTGGTGGTTTGCAAAACGATTTCTGCATCCTGCTGCTGTGTCTATTTATGATTATATATTTCTCTGGGATGAAGACCTAGGAGTGCAACATTTTAATCCCAGAAGGTATTTGAATATTGTTAAAGCAGAAGGACTGGAAATATCACAGCCAGCTTTAGATCCAAATTCAACTGATATACATCACCGCATCACAATTCGAAAGAGAATGAATAAGTTTCACAGAAGAGTGTATGACAGCAGAGGCAGTGTGAAATGTTCAGATGATAGTGAGGGTCCACCATGTTCTGGATTTGTAGAAGGAATGGTCCCGGTTTTCTCAAGAGCCGCGTGGCATTGTGCGTGGCATCTTATTCAGAATGATCTTGTTCATGGATGGGGAATGGATATGAAACTTGGCTATTGTGCGCAGGGGGACCGGTCGAAAAAGGTCGGAGTTGTTGATAGTGAATTTATAGTGCATCAAGGAATACAAACGTTAGGCGGGGCTTCAGCTAAAAAGACCTCTAATAATGTGGATTTATCAAAGAAACATGCTCCTGTTGATGTTCGAGCTGAGATAAGGAGACAATCAACAACTGAGCTTCAAATATTTAGAAAACGATGGGAAAAGGCCGTGAAAGATGACACATGGTGGGTGGATCCTTTCTATAGACGAAAACAAATACAAGCCTAG 1179 39.86 MKEAKSLRNLLKRHLHFDWGRYGMKMKPFMGVAFIIMLYIVYRTTNYQYLQTELDSRLDPLYSTKDYAIASVNLKGLPRGIIETKSDLELKPLWSTSSSKSKGDISSTHNLLAVPVGLKQKRNVNTIVQKFLKENFTVILFHYDGKVDGWRDLDWHNSVIHIVAQNQTKWWFAKRFLHPAAVSIYDYIFLWDEDLGVQHFNPRRYLNIVKAEGLEISQPALDPNSTDIHHRITIRKRMNKFHRRVYDSRGSVKCSDDSEGPPCSGFVEGMVPVFSRAAWHCAWHLIQNDLVHGWGMDMKLGYCAQGDRSKKVGVVDSEFIVHQGIQTLGGASAKKTSNNVDLSKKHAPVDVRAEIRRQSTTELQIFRKRWEKAVKDDTWWVDPFYRRKQIQA 392
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01459 392 Pfam Protein of unknown function (DUF707) 75 375 IPR007877 -
Dapi20g01459 392 PANTHER OS06G0731900 PROTEIN 32 379 IPR007877 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01459 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr20:83740887 Dapi5g01624 Dapi-Chr5:107436132 dispersed
Dapi Dapi-Chr16:40858835 Dapi20g01459 Dapi-Chr20:83740887 wgd
Dapi Dapi-Chr20:83740887 Dapi4g01555 Dapi-Chr4:92255427 wgd