Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dapi20g01559	ATGGCGATGCCTAACTACCGAAGCCTCGTTGCCGCCCCTGTCACAATACTACGAACACTGGCCGCCGTCATCAGCCACCGCCACGAAAGCACAAGGTTGCGCCGTTCAATTTGGCAGAAAAACAACGGCAGCGCCTTCGCATCTGTTTCAGTAGCAGTTACCTCTACTCCTTATTCTAAACGTTACTCGGAATATGGTCGCTTGCTTCCATGCCCTGCTGAGAATTTTCAACCCCGAATCGAGCACTTAGTTGTTAAAGAAGGAGGAACCATTCTTGATTTCATTACCAAATCTTTGGATCTTCCACCTTTGTACGTTGCAGATCTTATTCATTTTGGAGCTATTTTCTATGCCCTTGTATGCCCAAAGCCTCCTATAACCGCCACACCGGAGGAACTCAAGTTGTACAATGAAGTTACTGACCCATCAGTCCTAAAACTGAGACCTTCAATTAAAGGAAAAACCATTAGAGAGGCACAAAACACTTTTAGGATTACTCATGTTGATCAGTTTGTTGAACCAGGGACATATGTGAGGGTGCATGTACGCCCAAAAAGATTTCCAAGATGTTATGAAATTGACTGGAGGTCGAGAATAATTGCTGTGACAGAGTCCTATGTGGTTCTCAACAAGCCTGCTGGCACATCAGTAGGTGGCACTACAGACAACATTGAAGAAACTTGTGTAAATTTTGCTACTCGTGCCTTGGAATTAACTACTCCATTAATGACAACTCATCAGATTGATAACTGCACAGAAGGCTGTGTTGTGCTAGCTAGAACTAAGGATTACTGTTCAGTTTTTCATAGAAAGATCAGGGAGAAACAAGTGAAGAAGCTTTATCTGGCACTTGCTGCTGCTTATGTGCCATGTGGAGTCATGACCCATTATATGCGACCATTTCGTATGGCTCCTAAAGTAGTTTCCAAAGAGTTCATTAAGGGATGGAACATGTGCCAACTTGAGGTCCTAGAATGCAGAAAAGTTCCTTGGCCGAATCAGTTAGTCGAAAAGACATACGGAATTGAGGGTATTAGTTGGCCTGATAAAGAGTTTGCATACGAGTGCAAAATCAACCTCTTAACTGGCCGAACTCACCAGATTCGAGCTCAATTGGCAGCTTGTGGTGCACCAATAGTGGGTGACTCGATGTATATGCCAGCAGCAATGGCAGAGTTAGCCAACCCTGGGCTAAACCCTTTTGGGGAGTACAAACAGCAATTTGAAGGCGAGGCCCATAGAGAACGGGCTGCAGAAGAATGGGCTGCAAAACATGGGAAGGAACCAGGGGTGGCCATTGGCCTGCAAGCTTGTCAAATTTCATGGGATGAAGGTGTCCATGTCTATGAAGCTGGACCTCCTTGGTGGGCTTAG	1374	45.34	MAMPNYRSLVAAPVTILRTLAAVISHRHESTRLRRSIWQKNNGSAFASVSVAVTSTPYSKRYSEYGRLLPCPAENFQPRIEHLVVKEGGTILDFITKSLDLPPLYVADLIHFGAIFYALVCPKPPITATPEELKLYNEVTDPSVLKLRPSIKGKTIREAQNTFRITHVDQFVEPGTYVRVHVRPKRFPRCYEIDWRSRIIAVTESYVVLNKPAGTSVGGTTDNIEETCVNFATRALELTTPLMTTHQIDNCTEGCVVLARTKDYCSVFHRKIREKQVKKLYLALAAAYVPCGVMTHYMRPFRMAPKVVSKEFIKGWNMCQLEVLECRKVPWPNQLVEKTYGIEGISWPDKEFAYECKINLLTGRTHQIRAQLAACGAPIVGDSMYMPAAMAELANPGLNPFGEYKQQFEGEAHRERAAEEWAAKHGKEPGVAIGLQACQISWDEGVHVYEAGPPWWA	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dapi20g01559	457	Gene3D	Pseudouridine synthase	192	443	-	-
	Dapi20g01559	457	CDD	PseudoU-synth-RluA-like	206	398	IPR006145	GO:0001522(InterPro)\|GO:0003723(InterPro)\|GO:0009451(InterPro)\|GO:0009982(InterPro)
	Dapi20g01559	457	PANTHER	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	118	457	IPR050188	GO:0000455(PANTHER)\|GO:0009982(PANTHER)
	Dapi20g01559	457	Pfam	RNA pseudouridylate synthase	206	374	IPR006145	GO:0001522(InterPro)\|GO:0003723(InterPro)\|GO:0009451(InterPro)\|GO:0009982(InterPro)
	Dapi20g01559	457	SUPERFAMILY	Pseudouridine synthase	191	392	IPR020103	GO:0001522(InterPro)\|GO:0003723(InterPro)\|GO:0009451(InterPro)\|GO:0009982(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dapi20g01559	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	260172	Dapi20g01559	Dapi4g01637
	264775	Dapi4g01637	Dapi20g01559
	385456	Dapi20g01559	Dapi31g02156
	385457	Dapi20g01559	Dapi4g01637

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Dapi	Dapi-Chr20:92793723	Dapi31g02156	Dapi-Chr31:105724713	wgd
	Dapi	Dapi-Chr20:92793723	Dapi4g01637	Dapi-Chr4:101089951	wgd