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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01581 ATGGCCACCCTAACCAATATCTTGATAACCCTCACCATTCTCATGGCTTTAGCCATAACTCTCTCTTCCACACCAACCCATCAAAATGCGTTTGACACTGAAGACGTTAAAGACGATATCGTAGTGTCGGATTCAACATCACGGGTTGGCAGGTTCCTTTCCCAACGACCCACAAGCTTAATGAAATGCAACAAGAACCCTAGACTTTGTCGGGCCAAGGGTAGCCTCGGACCAGACTGTTGTAATAAGAAATGTGTTAACGTGATGACCGATAAACAAAATTGTGGGTTATGTGGACGGAAATGCAAGTATATGGAGATTTGTTGCAAAGGGTCATGTGTGAACCCGATGGTGAACAAACGTCATTGCGGGGGGTGCAACTATGTGTGCAAGAGAGGCGACACTTGTGTGCGTGGGATGTGCAGCTATGCGTAA 435 46.44 MATLTNILITLTILMALAITLSSTPTHQNAFDTEDVKDDIVVSDSTSRVGRFLSQRPTSLMKCNKNPRLCRAKGSLGPDCCNKKCVNVMTDKQNCGLCGRKCKYMEICCKGSCVNPMVNKRHCGGCNYVCKRGDTCVRGMCSYA 144
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01581 144 Pfam Stigma-specific protein, Stig1 12 144 IPR006969 -
Dapi20g01581 144 PANTHER STIGMA-SPECIFIC STIG1-LIKE PROTEIN 3 7 144 IPR006969 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01581 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
260183 Dapi20g01581 Dapi4g01654
264786 Dapi4g01654 Dapi20g01581
385469 Dapi20g01581 Dapi4g01654
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr20:94101714 Dapi31g01906 Dapi-Chr31:94816055 dispersed
Dapi Dapi-Chr20:94101714 Dapi4g01654 Dapi-Chr4:102399177 wgd