Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi20g01729 | ATGGGCAACTACAGGTTCCGATTCTCATGGTTCTACACTTCCAATAACAAAATAACCAAAACCCAACCCATCACAACTTCATCATCATCATCGTCAGTATCATCTTTCCCATTATCATCGCAACCCGCAATTAACCACAGAAAATCCTATTATTTCACAAGAGACCTAACCGACCCGACCCGTATTCATTCCCCACCGCCGGAGACCAACCTACCAGACCCAAAAAGGAAGTCAACCAAGAAAAAAAAACCCATTTCCCCGAAAATACGAATTCGCCGGAAATTGAAGTCGCCGGAGCTCAATCCCGCTGCCGTGTGCGGCTGCCGGACCACGCCGGAGTCCAGTTTGACGTCGCCGGAGCAATCCGTTTACGAAAAAGTTGACCTCCCGCCGATTATTACAAAACCGGGTAAACAAAACGAATTCGGGTCGGGTAAAGAAAACGAATTCGGGTCGGGTAAATGGGTGATTGACGGAGGAAACCGGAGTTTATCGGTGCGGGTTGTGAAGGAGGGTATTATTGGAAGTCCGGTAGGAAAAGTTAAAGGAAACAGTTACTCGCCGAGGTTAGGGAATCGGGTTAAGGTTAACGGGATTAACGGTGGTCGGAGGAGAACCGGGAACCGGCGGAGTTTGTCGGAGAGTTTGGCGGTTGTGAAAACGTCGGTGGATCCGGGGAGAGATTTTAAGGAATCTATGGTTGAGATGATAATGGAGAATAATATTAAGAGTTCGAAAGATTTGGAAGATCTTCTTGCATGTTATCTTGCATTGAATTCCGATGAGTATCATGACTTGATTATTAAGGTATTCAAGCAAATTTGGTTTGAGAGTAGTGATATTAGGTTGTAG | 852 | 45.89 | MGNYRFRFSWFYTSNNKITKTQPITTSSSSSSVSSFPLSSQPAINHRKSYYFTRDLTDPTRIHSPPPETNLPDPKRKSTKKKKPISPKIRIRRKLKSPELNPAAVCGCRTTPESSLTSPEQSVYEKVDLPPIITKPGKQNEFGSGKENEFGSGKWVIDGGNRSLSVRVVKEGIIGSPVGKVKGNSYSPRLGNRVKVNGINGGRRRTGNRRSLSESLAVVKTSVDPGRDFKESMVEMIMENNIKSSKDLEDLLACYLALNSDEYHDLIIKVFKQIWFESSDIRL | 283 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi20g01729 | 283 | Pfam | Transcriptional repressor, ovate | 222 | 277 | IPR006458 | - | |
| Dapi20g01729 | 283 | ProSiteProfiles | OVATE domain profile. | 218 | 277 | IPR006458 | - | |
| Dapi20g01729 | 283 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
| Dapi20g01729 | 283 | MobiDBLite | consensus disorder prediction | 56 | 89 | - | - | |
| Dapi20g01729 | 283 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 217 | 276 | IPR006458 | - | |
| Dapi20g01729 | 283 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 29 | 277 | IPR038933 | GO:0045892(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi20g01729 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260241 | Dapi20g01729 | Dapi4g01793 | |
| 264844 | Dapi4g01793 | Dapi20g01729 | |
| 385539 | Dapi20g01729 | Dapi4g01793 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1912581 | Dapi | Dapi20g01729 | Dapi-Chr20:104905528 | Dapi27g00580 | Dapi-Chr27:12042714 | |
| 2026243 | Dapi | Dapi20g01729 | Dapi-Chr20:104905528 | Dapi4g01793 | Dapi-Chr4:113694851 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Dapi | Ovate | 9.3e-24 | No_clan | TF | OFP |