AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01752 ATGGAGAATGAAAAGAAGAAGAGACAGAAGAAAAAGAAGAACAAGCAGGGAAAAGCAAGTGTATCTGCTGTTGTTGGGGAATTGACTTCAGCAGAAAATAACAATCATGCAAATGTGGCTAATCAGAATCATCAGAACCTGAATTCTGATAATTCTGATGTGCCGAAAACAGTTGCGGATTCAGATAGAGAGTCCATTAGTGGAGCTGAAACTTCACGTTCAGTTGAGGCTGAGAGGTCCTATTGGTTAAACAGAGAGGCTTCCCTAGAACAAACGTTAAGAGAATTGCAAGAGCAATTGAACATGCACATACAAAGGGAGGCTGATCTTGAGAGAAATATTTCACTCTCACAGAAAGAAAGAAACTTATGGCATCATAAAGAGACTGAGCTTGAGGCAACAATTTCACAATTGCAAACAGAAAAACACTCTTGGCTTCAAAAGGAGGTGTGCTTTGAAGAAAAACATATGCAGATGGAAGCAGAAAGGGTTAACTTGGCACAAAAAGAGAACTTTGCAGCAGAAACAATAGCCTCTTTGAACAAGGACAATGCAAAGTTACAAGCACAGGTGATCGAGCTGGAAACGTCTATACACAATATTTCCCATCAAAATCAGCTGTTGAAAGAACATGTTTCTGATCTTCAGTCAAAGATTCAGGATCTTGAGAATGCTGTAGCTACCCATTTATCTTCTGAAAGGACAAAGCACATTACCGAATACGAGGACATGAATTTACAGTTGGAATCTGCACGAGCACTTGTTGCAAGATTGCTTTCTGAAAAAGAGAAGTTAGTTGAGAAGGTCCACATCTTAAAAACCGAGCTTGACCAGAAGACCGCAACAACCCATTCATCTTTATCTACTAAACCCGATGATCCAATAGTCAAAAATCCCAAAGCTTCTGCTGACATGGATGAAACTTCATCTTCTGAAACCGATCCAATTCCATCATCCGCCGAAAAACTAGATACAGTCAGCAACGTGGGCCCGCTATCCGAATCCAAAGAGGGAATGCCATCAGATAAACTTGTGAGTCATATGAATCCATTGGGTTCTGATTTGAATCAAATTTCTCAAGTAAGCATGGAGTCCAGCGAAATCGTGCAGATTTCATTAAATGAGAATGATGCCACATCAGCATCCTCTGTTCTCGACCTGGTGCCTCTCACAGACGCTCCTCTAATTGGTGCTCCGTTCAGGTTGATATCGTTTTTTGCGAGATACGTGAGTGGGGCCGACTTGGTTCAGAATTAA 1257 41.13 MENEKKKRQKKKKNKQGKASVSAVVGELTSAENNNHANVANQNHQNLNSDNSDVPKTVADSDRESISGAETSRSVEAERSYWLNREASLEQTLRELQEQLNMHIQREADLERNISLSQKERNLWHHKETELEATISQLQTEKHSWLQKEVCFEEKHMQMEAERVNLAQKENFAAETIASLNKDNAKLQAQVIELETSIHNISHQNQLLKEHVSDLQSKIQDLENAVATHLSSERTKHITEYEDMNLQLESARALVARLLSEKEKLVEKVHILKTELDQKTATTHSSLSTKPDDPIVKNPKASADMDETSSSETDPIPSSAEKLDTVSNVGPLSESKEGMPSDKLVSHMNPLGSDLNQISQVSMESSEIVQISLNENDATSASSVLDLVPLTDAPLIGAPFRLISFFARYVSGADLVQN 418
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01752 418 Coils Coil 205 225 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 26 55 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 278 341 - -
Dapi20g01752 418 Coils Coil 177 197 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 303 334 - -
Dapi20g01752 418 Coils Coil 241 275 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 278 292 - -
Dapi20g01752 418 Gene3D - 168 284 - -
Dapi20g01752 418 Coils Coil 86 113 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 1 78 - -
Dapi20g01752 418 MobiDBLite consensus disorder prediction 64 78 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01752 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
260252 Dapi20g01752 Dapi4g01815
264855 Dapi4g01815 Dapi20g01752
385552 Dapi20g01752 Dapi4g01815
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2026260 Dapi Dapi20g01752 Dapi-Chr20:106054954 Dapi4g01815 Dapi-Chr4:114778838