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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01755 ATGCAGACATCCTCATCGCCTGCACTATGTGCTATCGTTCCTGTAGATTGCGCGTTCAATTCTTCAAATCCGTTACCTTACCCTTCCAGTTTCAATTTCGGATTATCCACAGGGAGCAGGAAGCTTAAGATTTCTAGGTTGCAGGCTGGATTTTGGGAATCCATTAGGTCTGGGTTAATAAAGAACAACTCTACACAGGTTATCGAGCCACTTTCTAGTTCCCAAGAAGATGAACAACCTCTTCCAGAGGAATTTGTACTTGTCGAAAAAACGCTACCAGATGGAACAATTGAACAAATTATTTTTTCATCAGGTGCAGAAGTCGATGTATATGATCTCCAAGCCTTGTGTGATAAGGTTGGGTGGCCCAGAAGACCACTATCAAAGCTAGCTGCTGCACTGAGAAATAGCTACATGGTAGCAACGTTGCATTCCATAAAGAAATCAGCTGGAGAAGAATTAACAGAACCCAATAATGAGAAGAAGCTCATTGGCATGGCTCGTGCTACATCAGATCATGCATTCAATGCAACAATATGGGATGTCCTCGTAGATCCTACCTACCAGGGGCAAGGCCTTGGAAAAGCTCTAATTGAGAAACTTATAAGAGCTCTACTTCAGAGGGACATTGGCAACATATCACTATTTGCAGACAGTAAAGTTGTGGAGTTTTATAGGAATCTAGGATTTGAACCTGACCCAGAGGGTATCAAGGGTATGTTTTGGTACCCTAGGTTTTAG 741 42.51 MQTSSSPALCAIVPVDCAFNSSNPLPYPSSFNFGLSTGSRKLKISRLQAGFWESIRSGLIKNNSTQVIEPLSSSQEDEQPLPEEFVLVEKTLPDGTIEQIIFSSGAEVDVYDLQALCDKVGWPRRPLSKLAAALRNSYMVATLHSIKKSAGEELTEPNNEKKLIGMARATSDHAFNATIWDVLVDPTYQGQGLGKALIEKLIRALLQRDIGNISLFADSKVVEFYRNLGFEPDPEGIKGMFWYPRF 246
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01755 246 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 109 236 IPR016181 -
Dapi20g01755 246 Gene3D - 104 243 - -
Dapi20g01755 246 PANTHER ACYL-COA N-ACYLTRANSFERASE 11 244 IPR045039 GO:0005737(PANTHER)|GO:0008080(PANTHER)|GO:0008080(InterPro)
Dapi20g01755 246 Pfam Acetyltransferase (GNAT) family 159 230 IPR000182 GO:0016747(InterPro)
Dapi20g01755 246 CDD NAT-SF 159 215 - -
Dapi20g01755 246 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 100 246 IPR000182 GO:0016747(InterPro)
Dapi20g01755 246 FunFam Putative acetyltransferase NSI 104 243 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01755 K22450 aralkylamine N-acetyltransferase [EC:2.3.1.87]
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Event-related genes

Select Gene_1 Gene_2 Event_name
260255 Dapi20g01755 Dapi4g01818
264858 Dapi4g01818 Dapi20g01755
385555 Dapi20g01755 Dapi4g01818
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1912603 Dapi Dapi20g01755 Dapi-Chr20:106151759 Dapi30g00797 Dapi-Chr30:14706301
2026263 Dapi Dapi20g01755 Dapi-Chr20:106151759 Dapi4g01818 Dapi-Chr4:114817834
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Dapi Acetyltransf_1 2.5e-14 CL0257 TR GNAT