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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01759 ATGAGGCTTCAATTTCGAAGAACAGCGAAGATTGTTCTGCTTATTAGCTTCTTCTGGTGGCCAATTGTTGAATCTCAGATATCTAATCCTTTGCCAAAGCCTGCTAGGGCTCTTGATGCAACCTTACAGGACTATGCATACCGTGCATTCGATAATCCGCGTACTGGTACTCCCTATGACGGTATTGTCCCGCCGTATTTGACCGGGATTGAGATATCGGCAATGAGGCTTAGAAGCGGTAGTTTGTATCGTAGAGGCGTTCAAACGTTTAAGGAATTCATAATTCCTGTTGGTTTAAGAGAGCAGCCGTATGTGGAGAGACTTGTTTTGGTGTATCAAAACTTAGGGAATTGGTCCACAACTTATTACTCTTTGCCTGGTTACATTTATCTAGCTCCGATATTAGGTCTGCTTGCTTACAATGGTTCAGATTTGTCGGCTTCTAATATACCAGAACTTGATTTCTGGGCTTCTGAGGATGCTATTAGTGTAAAATTTGGAAGAATTGGACCGATACCAGTCGGTTTGGTTGCAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAACTTCACAAATTTGTTATCTGGCAATGTATGTTCAACAACTGAACAGGGGCATTTCTCCATTGTAGCTGCATCAGCTGTCGCTCCTGTTTCTATACCTCCGGCACCACCTGAGTCTGCACCGTCTGAACATACATCTAGTAGTAGAAAGAATGAGTCTAGGGTTTGGGGTATTATTGGGGCAGCAACGGGTGGAACTGCGTTGTTGGTGTTATTAGCATTGTTGATATTGTGGGCATGGCGGTACAAAAAGAGAAAAAGACTGCGCGAGTTGGAAAGGGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGGCACAAGAACATTGCCGAATTTTGAAAGCGAATTTGATGCTTGA 957 43.99 MRLQFRRTAKIVLLISFFWWPIVESQISNPLPKPARALDATLQDYAYRAFDNPRTGTPYDGIVPPYLTGIEISAMRLRSGSLYRRGVQTFKEFIIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPILGLLAYNGSDLSASNIPELDFWASEDAISVKFGRIGPIPVGLVAKCAWFDLHGQVNFTNLLSGNVCSTTEQGHFSIVAASAVAPVSIPPAPPESAPSEHTSSSRKNESRVWGIIGAATGGTALLVLLALLILWAWRYKKRKRLRELERAADAGEALRMTRIGSMRAPFALGTRTLPNFESEFDA 318
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01759 318 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
Dapi20g01759 318 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 17 316 IPR010605 GO:0016020(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01759 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
73009 Dapi11g00132 Dapi20g01759
78275 Dapi20g01759 Dapi27g00133
260257 Dapi20g01759 Dapi4g01821
264860 Dapi4g01821 Dapi20g01759
385558 Dapi20g01759 Dapi4g01821
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1912607 Dapi Dapi20g01759 Dapi-Chr20:106197612 Dapi23g01192 Dapi-Chr23:51470680
1976856 Dapi Dapi1g02156 Dapi-Chr1:121535006 Dapi20g01759 Dapi-Chr20:106197612
1984969 Dapi Dapi11g00132 Dapi-Chr11:2267457 Dapi20g01759 Dapi-Chr20:106197612
2008471 Dapi Dapi17g02729 Dapi-Chr17:138557219 Dapi20g01759 Dapi-Chr20:106197612
2024643 Dapi Dapi20g01759 Dapi-Chr20:106197612 Dapi27g00133 Dapi-Chr27:2483412
2026266 Dapi Dapi20g01759 Dapi-Chr20:106197612 Dapi4g01821 Dapi-Chr4:114882979