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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01770 ATGGAAACCACTAAACACATCACTCCTATCCTCTTATTACTTCTTTTCATCACCACATCAATTTCAGGTACCGTCACAGACACGGTGCCGGTGCCGGTGGGAACGGGAATGATTGAGTACATGGTGGGGGCTGAAATGGACGGCGGTGGGCGGCGGAGGAAGCTTGGTCCATTTCAGGTATGTTTGGTGTGTAGGTGCTGTGTGGTGGCGTCTGATCCAACTACTTGTTCAAACATGCCGTGCTGTTTTGGCATAGATTGTCAGCTTCCGAATAAGCCGTTTGGTGTTTGTGCTTTTGTTCCCAGGACCTGTAACTGTACCACTTGTGGTTGA 333 49.55 METTKHITPILLLLLFITTSISGTVTDTVPVPVGTGMIEYMVGAEMDGGGRRRKLGPFQVCLVCRCCVVASDPTTCSNMPCCFGIDCQLPNKPFGVCAFVPRTCNCTTCG 110
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01770 110 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 25 109 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01770 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
260263 Dapi20g01770 Dapi4g01837
264866 Dapi4g01837 Dapi20g01770
385567 Dapi20g01770 Dapi4g01837
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1897262 Dapi Dapi14g02279 Dapi-Chr14:106785555 Dapi20g01770 Dapi-Chr20:106485687
2026275 Dapi Dapi20g01770 Dapi-Chr20:106485687 Dapi4g01837 Dapi-Chr4:115376616