Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi20g01771 | ATGGGATTAATGAGTAAAGTGCAAAGTGTTGTAGTGTCTGGGTGGAGGAAGAATGGCTTGTTGTTGTTGTCTTTATCAAGGAGTATAAGTACCTTTGCAGCCGGTTATGATAACCGGATTTTGAAGTCGCCTTCTCTTGTTTCCCTTGACTTCCCTGATGTATGGAGTTATTCTAGCTCTACCGGTTATAGTGAATCGTCAACCTACAAACTCGCTAGTGAACATACTGCTAGAGTGATCAATGGAAAACAAATTGCTGAGGAAATTATATCGAAGGTAGCCATTGAAGTAACAAGGATGAAGAAAACAATTGGTAAAGTTCCAGGACTGGGTGTGATTCTAGTAGGCGAGAGAAAAGATTCCCTAACATACGTTCGTAACAAGGTAAACGCATGTGAAGAAGCTGGAATCAAGTTCAAACTGACTAAATTTTTGGACAATTGTACCGAAGATGAAGTTTGTGATGCTATAATACGGTTTAACGCAGATCCATCTTTTCATGGTATCCTTGTCCAGCTTCCTCTTCCTCAGCATTTGAATGAAGAGAAGATTCTGGGTGTGTTGAAATTGGAAAAAGATGTAGATGGTTTTCATCCCATGAATATGGGAAATCTAGCTATGAGGGGAAGGGACCCGTTGTTTGTACCCTGCACTCCAAAAGGATGTGTTGAGTTGTTAATTAGATATGGAGTGGAGATTATGGGTAAGAAAGCGGTTGTTATTGGAAGAAGCAACATTGTTGGTTTACCCGCGTCCTTGCTGTTACAGAGGCACCATGCAACAGTTACCATTGTGACTGCATTAACATCAAACCCCGAAGAAATCACACGTGAAGCTGATATTTTGATAAGCGGGGTAGGAGTCCCTAATATGGTTCGTGGAAGCTGGGTGAAGCCTGGCGCCGTCGTGGTTGATGTTGGAACTTATCCAATTGAGGACACGAGCTGTGAGCTAGGGTATCGGCTGATAGGAGATGTGTGCTATGAGGAAGCATCTAAGGTAGCTTCTTTGATCACCCCTGTTCCGGGAGGAGTGGGGCCCATGACAGTTGCAATGCTGCTGTGCAACACTCTTGAATCCGCTACCCGTAAGTACAATTTTGTTTAA | 1107 | 43.09 | MGLMSKVQSVVVSGWRKNGLLLLSLSRSISTFAAGYDNRILKSPSLVSLDFPDVWSYSSSTGYSESSTYKLASEHTARVINGKQIAEEIISKVAIEVTRMKKTIGKVPGLGVILVGERKDSLTYVRNKVNACEEAGIKFKLTKFLDNCTEDEVCDAIIRFNADPSFHGILVQLPLPQHLNEEKILGVLKLEKDVDGFHPMNMGNLAMRGRDPLFVPCTPKGCVELLIRYGVEIMGKKAVVIGRSNIVGLPASLLLQRHHATVTIVTALTSNPEEITREADILISGVGVPNMVRGSWVKPGAVVVDVGTYPIEDTSCELGYRLIGDVCYEEASKVASLITPVPGGVGPMTVAMLLCNTLESATRKYNFV | 368 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi20g01771 | 368 | FunFam | C-1-tetrahydrofolate synthase, cytoplasmic, putative | 82 | 222 | - | - | |
| Dapi20g01771 | 368 | ProSitePatterns | Tetrahydrofolate dehydrogenase-cyclohydrolase signature 2. | 342 | 350 | IPR020867 | GO:0003824(InterPro) | |
| Dapi20g01771 | 368 | Pfam | Tetrahydrofolate dehydrogenase-cyclohydrolase, catalytic domain | 80 | 195 | IPR020630 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | Pfam | Tetrahydrofolate dehydrogenase-cyclohydrolase, NAD(P)-binding domain | 198 | 364 | IPR020631 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 197 | 363 | IPR036291 | - | |
| Dapi20g01771 | 368 | SUPERFAMILY | Aminoacid dehydrogenase-like, N-terminal domain | 77 | 196 | IPR046346 | - | |
| Dapi20g01771 | 368 | Gene3D | Leucine Dehydrogenase, chain A, domain 1 | 82 | 359 | - | - | |
| Dapi20g01771 | 368 | FunFam | Bifunctional protein FolD | 214 | 341 | - | - | |
| Dapi20g01771 | 368 | Gene3D | - | 80 | 341 | - | - | |
| Dapi20g01771 | 368 | Hamap | Bifunctional protein FolD [folD]. | 77 | 365 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PANTHER | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED | 76 | 366 | - | GO:0004477(PANTHER)|GO:0004488(PANTHER)|GO:0005829(PANTHER)|GO:0035999(PANTHER) | |
| Dapi20g01771 | 368 | CDD | NAD-bind-m-THF-DH-Cyclohyd | 191 | 361 | IPR020631 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 184 | 205 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 108 | 130 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 149 | 176 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 280 | 309 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 338 | 356 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 231 | 251 | IPR000672 | GO:0004488(InterPro) | |
| Dapi20g01771 | 368 | PRINTS | Tetrahydrofolate dehydrogenase-cyclohydrolase family signature | 321 | 337 | IPR000672 | GO:0004488(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi20g01771 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260264 | Dapi20g01771 | Dapi4g01838 | |
| 264867 | Dapi4g01838 | Dapi20g01771 | |
| 385568 | Dapi20g01771 | Dapi4g01838 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1912617 | Dapi | Dapi20g01771 | Dapi-Chr20:106488497 | Dapi23g02606 | Dapi-Chr23:115959569 | |
| 2026276 | Dapi | Dapi20g01771 | Dapi-Chr20:106488497 | Dapi4g01838 | Dapi-Chr4:115380353 |