AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01777 ATGGGCCAAGCCGCCGTAAGCAAGCCTGCTGAAAAGGCCGGCACGAGAAAATCAGCCCGAAACCGAAACCCCACTCAGAGTCAGCCTCCGTGTGCGCTAACAATGGCGCTTAAACACCATAACTTCTTCTTCTTCTTCATCCTCTTCACCATTCACATGGCCACACTCGTTTCCGCCGATGCGATCCAAGGCTGCGGCGGTTTTATCGAGGCGAGTTCGTCTTTGATCAAGTCAAGGAAGCCAACCGATTCCAAATTGGACTATTCGCATATTACGGTTGAGCTGCGCACTTTGGATGGCTTGGTGAAGGATCGGACACAATGTGCTCCTAATGGTTACTACTTCATCCCTGTTTATGATAAGGGTTCTTTTGTTATCAAAATTAAAGGACCAGAAGGATGGTCATGGGCCCCAGATCAGGTTCCTGTGCTTGTCGATCATACTGGCTGTAATGGCAATGAGGACATAAATTTTCGGTTTACAGGGTTCACTATTAGTGGAAAAGTTGTGGGAGCAGTTGGCGGTGCAAGTTGTTCTTCTACAAATGGTGGCCCATCAAATGTAAAAGTTGAGCTGTTGAATTCAAATGGGAATGTTGTATCGTCTGTTTTTACATCAGTAGCTGGAAGTTACTCTTTCACCAATATTATTCCAGGGCGATATAACCTACGGGCATCCCATGAAGACTTGAATATTGAAGTTAAAGGTTCAACAGAGGTTGAATTGGGATTTGGAAATAGACAAGTTGATGATGTCTTTTTTGTCTCTGGTTATGATATTCGTGGATTGGTAGTTGCACAGGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGATGATGTTAAAGAAGTGCACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAGAACTGCTCTTTGTCATGCAATATCTGATGTTGATGGAAAATTTAATTTCAAGTCAATTCCATGCGGTGTTTATGAGCTTATACCTTATTATAAGGGTGAGAATACAGTTTTTGATGTTTCCCCTCCCTCTGCCACTGTGACTGTTCAGCATGATCATGCAACAGTATCTGAAAAGTTTCAGGTTACTGGTTTTTCTGTTGGGGGTCGTGTTGTTGATTCTGATGGCAATGGAGTGGATGGTGTAAAAATTGTGGTGGATGGCACTGAGAGGTCCGTCACCGATAAAAAAGGATATTATAAGCTCGACCAGGTTACATCTAAACAGTATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGAGTAACTTCATGGTTTTACCAAATATGGCATCGGTTGCTGATATCAAAGCAGTGTCTTATGATGTTTGTGGCTCAGTGCAGACAGTTGATTCTGGTTACAAAGCAAAAGTGGCTCTGACTCATGGACCGGATAATGTTAAGCCACAAATGAAACAAACTGATGATAACGGCTATTTCTGCTTTGAGGTTCCACCTGGTGACTATCGGTTATCAGCTATTGCCGCCACACCTGAAACTGCTCCGCATCTTTTATTTTCACCACCGCATATTGATGTCAATGTCAATGGTCCATTGTTGTCACCAAAATTTTATCAGGCACAAGTTAATGTAGGTGGCTCGGTAACTTGCAAAGAGAAATGTGATTCATCTGTTTCTGTTGATCTTGTGAGATTGGATGCTAAAAGCAATGTAGAAAGGCAGACAGTTGGTTTGACTGACCAAAGTAGTGAATTTTTATTTCAAAATGTCCTACCTGGAAAATATAAGCTTGAGGTCAAACACGTTTCTAAAGGAGCTGTATCTGAAGAAGATAACTGGTGCTGGGAACAGAGCTCTGTAGTTCTTAATGTTGGAATAGAAGATGTTAAAGGGATTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCCACTCATGATGTAGATGCATATCTGCATCAATCACATGGTTCCCGTGTGGATCTGAAAATTAAGAAAGGTCCTCAACGCATATGCATTGAATCTCCTGGAGTGCATGAACTTCACTTTGTAAACTCGTGTATACTTTTCGGGAACTCGCCTGTGAAAATTGACACCGCCAATACATCGCCTATCTATCTGAAAGGAGAGAAGTATCTACTCCAAGGAGAAATTAAGGTTGAATTGACCTCACAAAATGGTGTTAACCAGTTACCTAAAAATATAGTGGTTGACATTTTGAACGATGAAGGAACAGTTATCGATGGCACTACTGCAAAATTTGTTGTCAATGAGAAGGACCAATCAAATGCAGCTCTTTATAAGTATAAAGTATGGGCAAATCCTGGGGAAAAACTTACATTTGCACCTCGGGATATTCGGAGCGAAAATGAGAAAAAGATTTTATTTTATCCTAGACAACATCAGGTCAAAGTGGCACAAGATGGCTGTCAAGCTTCAGTTCCTGCATTTTCTGGGCGACTTGGGTTGTACATTGAAGGATCGGTTTCTCCCCCACTCCCAGATGTTATTATTAGAATCATAGCTTCTGGAGATAGTCAAAATGCTCAAATCAAGAAAAATGAATTGGCATTTGAAACTACTACAAACACAGATGGGTTGTTCATTGGCGGGCCCCTATATGATGACATCACTTACCATACCCAAGCTTCAAAGCCTGGTTTTCATGTAAAGGAAATTGGACCCAACTCCTTTTCCTGTCAGAAGCTTGGTCAAATCTCTGTTCGTATACATTCTAAAGAAGATGCCAATGATTTATTTCCCTCGGTATTGTTATCATTAAGCGGGGAAGACGGTTATAGAAATAACTCGATATCTGCTGCTGGTGGAACTTTTGTATTTGATAATTTATTCCCTGGAAGTTTTTATCTCCGCCCTCTGTTAAAGGAGTATGCTTTCTCACCATCAGCACAAGCAGTTGAACTTGGGTCCGGGGAGTCCACGGAAGTTGTCTTCCACGCTACACGTGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGTGTTTCAGTTGAGGCCCGCTCTGACACAAAAGGTTATTATGAGGAAACTGTCACAGATTCATTAGGAAATTACCGCCTAAGGGGACTTCACCCCGATACCACTTACACGATTAAAATAGCAAAAATAAACGGGTTTGGAACCTCTAACATCGAACGGGCGTCCCCAGAATCTGTTGATGTCAAGGTTGGATATGTAGACATCAAGGGATTAGACTTTTTGATTTTTGAGCAGCCAGAAATAACTTTATTAACCGGAACGGTTCAAGGAAGCAGAAATAAGGAGGTTTATGAACACCTAAAGTTGGAAATTAGATCGGCTAGTGATCCATCCAGTATCGAATCATTGTTACCTTTGTCAATTTCACACTTCTTCCAGGTAAAGGGTTTGCCAAGGGGCAAACATCTGCTGCAGCTTCGGTCTACTCAACGAGCCCTCAGATTCGAATCTGAAGTGGTTGAGGTTGATTTGGAGAAAAATACCCAAGTTCATGTGGGTCCCTTGACTTTCAAAGTTGAAGATGATCACCATAAACAGGAGTTGACTCCGGCACCTGTCTATCCGCTTATTATTGGAGTATCAGTGATTGCATTATTTATCAGCATGCCAAGATTAAAAGACATGTACCAAAGCAATGTAGGAGTACTGGTACCGGGACCCAGTGCAGCGACAAAGAAAGCCGTGCGAAAGAAGACTTACTAG 3690 41.9 MGQAAVSKPAEKAGTRKSARNRNPTQSQPPCALTMALKHHNFFFFFILFTIHMATLVSADAIQGCGGFIEASSSLIKSRKPTDSKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKIKGPEGWSWAPDQVPVLVDHTGCNGNEDINFRFTGFTISGKVVGAVGGASCSSTNGGPSNVKVELLNSNGNVVSSVFTSVAGSYSFTNIIPGRYNLRASHEDLNIEVKGSTEVELGFGNRQVDDVFFVSGYDIRGLVVAQGNPILGVHFYLYSDDVKEVHCPQGSGNPSGDRTALCHAISDVDGKFNFKSIPCGVYELIPYYKGENTVFDVSPPSATVTVQHDHATVSEKFQVTGFSVGGRVVDSDGNGVDGVKIVVDGTERSVTDKKGYYKLDQVTSKQYLIEAKKEHYKFDKLSNFMVLPNMASVADIKAVSYDVCGSVQTVDSGYKAKVALTHGPDNVKPQMKQTDDNGYFCFEVPPGDYRLSAIAATPETAPHLLFSPPHIDVNVNGPLLSPKFYQAQVNVGGSVTCKEKCDSSVSVDLVRLDAKSNVERQTVGLTDQSSEFLFQNVLPGKYKLEVKHVSKGAVSEEDNWCWEQSSVVLNVGIEDVKGINFVQKGYWVNLVSTHDVDAYLHQSHGSRVDLKIKKGPQRICIESPGVHELHFVNSCILFGNSPVKIDTANTSPIYLKGEKYLLQGEIKVELTSQNGVNQLPKNIVVDILNDEGTVIDGTTAKFVVNEKDQSNAALYKYKVWANPGEKLTFAPRDIRSENEKKILFYPRQHQVKVAQDGCQASVPAFSGRLGLYIEGSVSPPLPDVIIRIIASGDSQNAQIKKNELAFETTTNTDGLFIGGPLYDDITYHTQASKPGFHVKEIGPNSFSCQKLGQISVRIHSKEDANDLFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFHATRVAYSAMGVVTLLSGLPKEGVSVEARSDTKGYYEETVTDSLGNYRLRGLHPDTTYTIKIAKINGFGTSNIERASPESVDVKVGYVDIKGLDFLIFEQPEITLLTGTVQGSRNKEVYEHLKLEIRSASDPSSIESLLPLSISHFFQVKGLPRGKHLLQLRSTQRALRFESEVVEVDLEKNTQVHVGPLTFKVEDDHHKQELTPAPVYPLIIGVSVIALFISMPRLKDMYQSNVGVLVPGPSAATKKAVRKKTY 1229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01777 1229 Gene3D - 365 444 - -
Dapi20g01777 1229 Gene3D Immunoglobulins 177 254 IPR013783 -
Dapi20g01777 1229 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 62 1207 IPR051417 GO:0005789(PANTHER)
Dapi20g01777 1229 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 82 158 IPR055075 -
Dapi20g01777 1229 SUPERFAMILY Cna protein B-type domain 179 230 - -
Dapi20g01777 1229 SUPERFAMILY Carboxypeptidase regulatory domain-like 364 457 IPR008969 -
Dapi20g01777 1229 FunFam Carbohydrate-binding-like fold 179 251 - -
Dapi20g01777 1229 SUPERFAMILY Cna protein B-type domain 985 1058 - -
Dapi20g01777 1229 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 811 883 IPR055073 -
Dapi20g01777 1229 MobiDBLite consensus disorder prediction 1 30 - -
Dapi20g01777 1229 Pfam Carboxypeptidase regulatory-like domain 364 437 - -
Dapi20g01777 1229 SUPERFAMILY Cna protein B-type domain 906 966 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01777 K26500 BOS complex subunit NOMO
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Event-related genes

Select Gene_1 Gene_2 Event_name
260267 Dapi20g01777 Dapi4g01843
264870 Dapi4g01843 Dapi20g01777
385571 Dapi20g01777 Dapi4g01843
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2026280 Dapi Dapi20g01777 Dapi-Chr20:106661560 Dapi4g01843 Dapi-Chr4:115541465