Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi20g01777 | ATGGGCCAAGCCGCCGTAAGCAAGCCTGCTGAAAAGGCCGGCACGAGAAAATCAGCCCGAAACCGAAACCCCACTCAGAGTCAGCCTCCGTGTGCGCTAACAATGGCGCTTAAACACCATAACTTCTTCTTCTTCTTCATCCTCTTCACCATTCACATGGCCACACTCGTTTCCGCCGATGCGATCCAAGGCTGCGGCGGTTTTATCGAGGCGAGTTCGTCTTTGATCAAGTCAAGGAAGCCAACCGATTCCAAATTGGACTATTCGCATATTACGGTTGAGCTGCGCACTTTGGATGGCTTGGTGAAGGATCGGACACAATGTGCTCCTAATGGTTACTACTTCATCCCTGTTTATGATAAGGGTTCTTTTGTTATCAAAATTAAAGGACCAGAAGGATGGTCATGGGCCCCAGATCAGGTTCCTGTGCTTGTCGATCATACTGGCTGTAATGGCAATGAGGACATAAATTTTCGGTTTACAGGGTTCACTATTAGTGGAAAAGTTGTGGGAGCAGTTGGCGGTGCAAGTTGTTCTTCTACAAATGGTGGCCCATCAAATGTAAAAGTTGAGCTGTTGAATTCAAATGGGAATGTTGTATCGTCTGTTTTTACATCAGTAGCTGGAAGTTACTCTTTCACCAATATTATTCCAGGGCGATATAACCTACGGGCATCCCATGAAGACTTGAATATTGAAGTTAAAGGTTCAACAGAGGTTGAATTGGGATTTGGAAATAGACAAGTTGATGATGTCTTTTTTGTCTCTGGTTATGATATTCGTGGATTGGTAGTTGCACAGGGAAACCCTATTTTGGGGGTTCACTTTTATCTGTACTCTGATGATGTTAAAGAAGTGCACTGCCCACAGGGTTCTGGTAACCCATCTGGAGATAGAACTGCTCTTTGTCATGCAATATCTGATGTTGATGGAAAATTTAATTTCAAGTCAATTCCATGCGGTGTTTATGAGCTTATACCTTATTATAAGGGTGAGAATACAGTTTTTGATGTTTCCCCTCCCTCTGCCACTGTGACTGTTCAGCATGATCATGCAACAGTATCTGAAAAGTTTCAGGTTACTGGTTTTTCTGTTGGGGGTCGTGTTGTTGATTCTGATGGCAATGGAGTGGATGGTGTAAAAATTGTGGTGGATGGCACTGAGAGGTCCGTCACCGATAAAAAAGGATATTATAAGCTCGACCAGGTTACATCTAAACAGTATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGAGTAACTTCATGGTTTTACCAAATATGGCATCGGTTGCTGATATCAAAGCAGTGTCTTATGATGTTTGTGGCTCAGTGCAGACAGTTGATTCTGGTTACAAAGCAAAAGTGGCTCTGACTCATGGACCGGATAATGTTAAGCCACAAATGAAACAAACTGATGATAACGGCTATTTCTGCTTTGAGGTTCCACCTGGTGACTATCGGTTATCAGCTATTGCCGCCACACCTGAAACTGCTCCGCATCTTTTATTTTCACCACCGCATATTGATGTCAATGTCAATGGTCCATTGTTGTCACCAAAATTTTATCAGGCACAAGTTAATGTAGGTGGCTCGGTAACTTGCAAAGAGAAATGTGATTCATCTGTTTCTGTTGATCTTGTGAGATTGGATGCTAAAAGCAATGTAGAAAGGCAGACAGTTGGTTTGACTGACCAAAGTAGTGAATTTTTATTTCAAAATGTCCTACCTGGAAAATATAAGCTTGAGGTCAAACACGTTTCTAAAGGAGCTGTATCTGAAGAAGATAACTGGTGCTGGGAACAGAGCTCTGTAGTTCTTAATGTTGGAATAGAAGATGTTAAAGGGATTAACTTTGTTCAGAAAGGTTATTGGGTTAACTTAGTTTCCACTCATGATGTAGATGCATATCTGCATCAATCACATGGTTCCCGTGTGGATCTGAAAATTAAGAAAGGTCCTCAACGCATATGCATTGAATCTCCTGGAGTGCATGAACTTCACTTTGTAAACTCGTGTATACTTTTCGGGAACTCGCCTGTGAAAATTGACACCGCCAATACATCGCCTATCTATCTGAAAGGAGAGAAGTATCTACTCCAAGGAGAAATTAAGGTTGAATTGACCTCACAAAATGGTGTTAACCAGTTACCTAAAAATATAGTGGTTGACATTTTGAACGATGAAGGAACAGTTATCGATGGCACTACTGCAAAATTTGTTGTCAATGAGAAGGACCAATCAAATGCAGCTCTTTATAAGTATAAAGTATGGGCAAATCCTGGGGAAAAACTTACATTTGCACCTCGGGATATTCGGAGCGAAAATGAGAAAAAGATTTTATTTTATCCTAGACAACATCAGGTCAAAGTGGCACAAGATGGCTGTCAAGCTTCAGTTCCTGCATTTTCTGGGCGACTTGGGTTGTACATTGAAGGATCGGTTTCTCCCCCACTCCCAGATGTTATTATTAGAATCATAGCTTCTGGAGATAGTCAAAATGCTCAAATCAAGAAAAATGAATTGGCATTTGAAACTACTACAAACACAGATGGGTTGTTCATTGGCGGGCCCCTATATGATGACATCACTTACCATACCCAAGCTTCAAAGCCTGGTTTTCATGTAAAGGAAATTGGACCCAACTCCTTTTCCTGTCAGAAGCTTGGTCAAATCTCTGTTCGTATACATTCTAAAGAAGATGCCAATGATTTATTTCCCTCGGTATTGTTATCATTAAGCGGGGAAGACGGTTATAGAAATAACTCGATATCTGCTGCTGGTGGAACTTTTGTATTTGATAATTTATTCCCTGGAAGTTTTTATCTCCGCCCTCTGTTAAAGGAGTATGCTTTCTCACCATCAGCACAAGCAGTTGAACTTGGGTCCGGGGAGTCCACGGAAGTTGTCTTCCACGCTACACGTGTTGCTTACAGTGCCATGGGTGTGGTTACTCTGTTATCTGGTCTACCAAAAGAAGGTGTTTCAGTTGAGGCCCGCTCTGACACAAAAGGTTATTATGAGGAAACTGTCACAGATTCATTAGGAAATTACCGCCTAAGGGGACTTCACCCCGATACCACTTACACGATTAAAATAGCAAAAATAAACGGGTTTGGAACCTCTAACATCGAACGGGCGTCCCCAGAATCTGTTGATGTCAAGGTTGGATATGTAGACATCAAGGGATTAGACTTTTTGATTTTTGAGCAGCCAGAAATAACTTTATTAACCGGAACGGTTCAAGGAAGCAGAAATAAGGAGGTTTATGAACACCTAAAGTTGGAAATTAGATCGGCTAGTGATCCATCCAGTATCGAATCATTGTTACCTTTGTCAATTTCACACTTCTTCCAGGTAAAGGGTTTGCCAAGGGGCAAACATCTGCTGCAGCTTCGGTCTACTCAACGAGCCCTCAGATTCGAATCTGAAGTGGTTGAGGTTGATTTGGAGAAAAATACCCAAGTTCATGTGGGTCCCTTGACTTTCAAAGTTGAAGATGATCACCATAAACAGGAGTTGACTCCGGCACCTGTCTATCCGCTTATTATTGGAGTATCAGTGATTGCATTATTTATCAGCATGCCAAGATTAAAAGACATGTACCAAAGCAATGTAGGAGTACTGGTACCGGGACCCAGTGCAGCGACAAAGAAAGCCGTGCGAAAGAAGACTTACTAG | 3690 | 41.9 | MGQAAVSKPAEKAGTRKSARNRNPTQSQPPCALTMALKHHNFFFFFILFTIHMATLVSADAIQGCGGFIEASSSLIKSRKPTDSKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKIKGPEGWSWAPDQVPVLVDHTGCNGNEDINFRFTGFTISGKVVGAVGGASCSSTNGGPSNVKVELLNSNGNVVSSVFTSVAGSYSFTNIIPGRYNLRASHEDLNIEVKGSTEVELGFGNRQVDDVFFVSGYDIRGLVVAQGNPILGVHFYLYSDDVKEVHCPQGSGNPSGDRTALCHAISDVDGKFNFKSIPCGVYELIPYYKGENTVFDVSPPSATVTVQHDHATVSEKFQVTGFSVGGRVVDSDGNGVDGVKIVVDGTERSVTDKKGYYKLDQVTSKQYLIEAKKEHYKFDKLSNFMVLPNMASVADIKAVSYDVCGSVQTVDSGYKAKVALTHGPDNVKPQMKQTDDNGYFCFEVPPGDYRLSAIAATPETAPHLLFSPPHIDVNVNGPLLSPKFYQAQVNVGGSVTCKEKCDSSVSVDLVRLDAKSNVERQTVGLTDQSSEFLFQNVLPGKYKLEVKHVSKGAVSEEDNWCWEQSSVVLNVGIEDVKGINFVQKGYWVNLVSTHDVDAYLHQSHGSRVDLKIKKGPQRICIESPGVHELHFVNSCILFGNSPVKIDTANTSPIYLKGEKYLLQGEIKVELTSQNGVNQLPKNIVVDILNDEGTVIDGTTAKFVVNEKDQSNAALYKYKVWANPGEKLTFAPRDIRSENEKKILFYPRQHQVKVAQDGCQASVPAFSGRLGLYIEGSVSPPLPDVIIRIIASGDSQNAQIKKNELAFETTTNTDGLFIGGPLYDDITYHTQASKPGFHVKEIGPNSFSCQKLGQISVRIHSKEDANDLFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVVFHATRVAYSAMGVVTLLSGLPKEGVSVEARSDTKGYYEETVTDSLGNYRLRGLHPDTTYTIKIAKINGFGTSNIERASPESVDVKVGYVDIKGLDFLIFEQPEITLLTGTVQGSRNKEVYEHLKLEIRSASDPSSIESLLPLSISHFFQVKGLPRGKHLLQLRSTQRALRFESEVVEVDLEKNTQVHVGPLTFKVEDDHHKQELTPAPVYPLIIGVSVIALFISMPRLKDMYQSNVGVLVPGPSAATKKAVRKKTY | 1229 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi20g01777 | 1229 | Gene3D | - | 365 | 444 | - | - | |
| Dapi20g01777 | 1229 | Gene3D | Immunoglobulins | 177 | 254 | IPR013783 | - | |
| Dapi20g01777 | 1229 | PANTHER | CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING | 62 | 1207 | IPR051417 | GO:0005789(PANTHER) | |
| Dapi20g01777 | 1229 | Pfam | BOS complex subunit NOMO1-like, first beta sandwich domain | 82 | 158 | IPR055075 | - | |
| Dapi20g01777 | 1229 | SUPERFAMILY | Cna protein B-type domain | 179 | 230 | - | - | |
| Dapi20g01777 | 1229 | SUPERFAMILY | Carboxypeptidase regulatory domain-like | 364 | 457 | IPR008969 | - | |
| Dapi20g01777 | 1229 | FunFam | Carbohydrate-binding-like fold | 179 | 251 | - | - | |
| Dapi20g01777 | 1229 | SUPERFAMILY | Cna protein B-type domain | 985 | 1058 | - | - | |
| Dapi20g01777 | 1229 | Pfam | BOS complex subunit NOMO1-like, beta sandwich domain | 811 | 883 | IPR055073 | - | |
| Dapi20g01777 | 1229 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Dapi20g01777 | 1229 | Pfam | Carboxypeptidase regulatory-like domain | 364 | 437 | - | - | |
| Dapi20g01777 | 1229 | SUPERFAMILY | Cna protein B-type domain | 906 | 966 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi20g01777 | K26500 | BOS complex subunit NOMO |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260267 | Dapi20g01777 | Dapi4g01843 | |
| 264870 | Dapi4g01843 | Dapi20g01777 | |
| 385571 | Dapi20g01777 | Dapi4g01843 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2026280 | Dapi | Dapi20g01777 | Dapi-Chr20:106661560 | Dapi4g01843 | Dapi-Chr4:115541465 |