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AGRP

Asteraceae Genomic Research Platform

AGRP Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01793 ATGTCTCCTCTCCTAAACCTAACCCTAATCTCCCTCCTCGTCTTATCCTCTTCATCTCTTCCAATCACCTCCCCACCAACAGCCTACGAAGCACTCGAATCATACGACTTCCCGGCCGGTCTCCTTCCCGTCGGCGTCACCGGCTACACTCTCGACGAAGAAACCGGCAAATTCGAAGCCTACCTCGGCCAAACCTGCTCTTACACAGTTCAAGGATACAACCTAAAATACAAGTCAACAATATCCGGAGTGATTAGTAAAGATAAACTCACTGATTTAAAAGGAGTGAGCGTGAAGGTGTTGTTTTTCTGGTTGGATATTGTTGAAGTTAGTCGAGACGGCGATGAGTTGTATTTGTCGGTCGGGATATTATCTGCGGGGTTTGATATTAGTGGATTTGTTGAGTCGCCGCAGTGTGGGTGTGGGTTTGATTGCAATGATATCGGAACCGCGGAGTTGCGGGATTCTTTGTGA 474 47.68 MSPLLNLTLISLLVLSSSSLPITSPPTAYEALESYDFPAGLLPVGVTGYTLDEETGKFEAYLGQTCSYTVQGYNLKYKSTISGVISKDKLTDLKGVSVKVLFFWLDIVEVSRDGDELYLSVGILSAGFDISGFVESPQCGCGFDCNDIGTAELRDSL 157
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01793 157 SUPERFAMILY At5g01610-like 6 145 IPR036758 -
Dapi20g01793 157 Gene3D - 16 136 IPR036758 -
Dapi20g01793 157 PANTHER T31J12.3 PROTEIN-RELATED 16 140 IPR007493 -
Dapi20g01793 157 Pfam Protein of unknown function, DUF538 28 133 IPR007493 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01793 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
73028 Dapi11g00221 Dapi20g01793
78286 Dapi20g01793 Dapi7g02582
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr11:3641930 Dapi20g01793 Dapi-Chr20:107122718 wgd
Dapi Dapi-Chr20:107122718 Dapi7g02582 Dapi-Chr7:111609289 wgd