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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01812 ATGGCCATCAAACTGTACGGAGCCGCCGGTTCAACCGCTACTCTCCGAGTTAAGGCTTGCCTCGCCGAGAAGGACATCGAATACGAGTTCGTTAGCGTTGACATGAGCAAGAAAGAACACAAGAGTCCCGAATTCCTATCCCGTAACCCGTTTGGTCAGGTTCCGGCGCTCGAAGACGGCGATCTCAAGCTGTTCGAATCAAGGGCGATTACGCAATATCTAGCTCACAGATACGCCGATAAAGGAAACGACCTGATAATCCAAGATCCAAAGAAGATGGCGATTCTGGCAGTGTGGATTGAAGTGGAGTCGCAGAAATTTGAGCCGGCGTCGTCGAAATTGGCGTGGGAGTTGGCTTACAAGCCGATGTTTGGGATGACTGCTGACGAGGCGACGGTGGAAGAGAACGAGAAGAAGTTAGAGCAAGTGCTTGACGTGTACGAATCACGGTTATCGGAAAGTAAGTATTTGGGAGGCGATTGCTTCACGTTGGCGGATCTGCACCACTTGCCTAATATCAAGTATTTGATGGGGACGAAGGCGAAGAGTTTGTTCGACGCGCGGCCGCATGTCAGCGCGTGGGTTGCTGATATTCTGTCCCGGCCTGCATGGGTGAAAGCAACCACGGTTTAG 633 51.82 MAIKLYGAAGSTATLRVKACLAEKDIEYEFVSVDMSKKEHKSPEFLSRNPFGQVPALEDGDLKLFESRAITQYLAHRYADKGNDLIIQDPKKMAILAVWIEVESQKFEPASSKLAWELAYKPMFGMTADEATVEENEKKLEQVLDVYESRLSESKYLGGDCFTLADLHHLPNIKYLMGTKAKSLFDARPHVSAWVADILSRPAWVKATTV 210
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01812 210 Gene3D Glutaredoxin 1 86 - -
Dapi20g01812 210 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 210 IPR010987 -
Dapi20g01812 210 CDD GST-N-Phi 2 77 - -
Dapi20g01812 210 SFLD Glutathione Transferase (cytosolic) 1 208 IPR040079 -
Dapi20g01812 210 SFLD Main.5: Phi-like 1 208 - -
Dapi20g01812 210 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 209 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Dapi20g01812 210 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
Dapi20g01812 210 SUPERFAMILY Thioredoxin-like 2 82 IPR036249 -
Dapi20g01812 210 Pfam Glutathione S-transferase, C-terminal domain 120 202 IPR004046 -
Dapi20g01812 210 FunFam Glutathione S-transferase F2 88 208 - -
Dapi20g01812 210 CDD GST-C-Phi 91 207 IPR034347 -
Dapi20g01812 210 Gene3D - 89 210 - -
Dapi20g01812 210 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Dapi20g01812 210 FunFam Glutathione S-transferase F2 2 86 - -
Dapi20g01812 210 SUPERFAMILY GST C-terminal domain-like 84 207 IPR036282 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01812 K00799 glutathione S-transferase [EC:2.5.1.18]
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Event-related genes

Select Gene_1 Gene_2 Event_name
75264 Dapi16g00019 Dapi20g01812
78295 Dapi20g01812 Dapi32g00016
78296 Dapi20g01812 Dapi7g02560
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:495187 Dapi20g01812 Dapi-Chr20:107754847 dispersed
Dapi Dapi-Chr20:107754847 Dapi7g02561 Dapi-Chr7:111322560 dispersed
Dapi Dapi-Chr20:107685451 Dapi20g01812 Dapi-Chr20:107754847 tandem
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Dapi31g01182 DST,WGDA 5 186 Glutathione S-transferase gene family AT2G02390 56.593 2.42e-67 204.0
Dapi7g02562 . 3 212 Glutathione S-transferase gene family AT2G02930 53.081 7.88e-78 231.0
Dapi7g02561 ACH 54 261 Glutathione S-transferase gene family AT2G47730 56.731 2.67e-81 241.0
Dapi7g02560 ACH 4 211 Glutathione S-transferase gene family AT4G02520 51.196 4.14e-69 209.0
Dapi7g02220 . 5 220 Glutathione S-transferase gene family AT3G09270 50.0 2.35e-68 207.0
Dapi31g01966 . 11 194 Glutathione S-transferase gene family AT5G02790 25.322 8.03e-07 48.1
Dapi18g00768 . 4 216 Glutathione S-transferase gene family AT1G78380 65.888 1.11e-105 302.0
Dapi19g01451 DST,WGDA 146 213 Glutathione S-transferase gene family AT2G02390 44.828 6.20e-14 63.5
Dapi19g01450 DST,WGDA 9 170 Glutathione S-transferase gene family AT2G02390 54.938 1.05e-52 165.0
Dapi19g01400 DST,WGDA 1 258 Glutathione S-transferase gene family AT5G16710 61.338 9.90e-123 349.0
Dapi2g00754 . 4 216 Glutathione S-transferase gene family AT1G78380 65.421 1.35e-104 299.0
Dapi2g00750 . 4 216 Glutathione S-transferase gene family AT1G78380 65.421 1.35e-104 299.0
Dapi10g00184 . 3 217 Glutathione S-transferase gene family AT1G10370 46.512 5.60e-66 202.0
Dapi10g00179 . 5 221 Glutathione S-transferase gene family AT1G10370 40.826 5.54e-51 164.0
Dapi10g00178 DST 4 221 Glutathione S-transferase gene family AT1G10370 38.813 3.74e-49 159.0
Dapi10g00177 . 3 226 Glutathione S-transferase gene family AT1G59700 40.444 5.41e-51 164.0
Dapi21g00997 . 56 157 Glutathione S-transferase gene family AT5G02780 35.294 4.61e-13 62.0
Dapi20g00856 . 1 112 Glutathione S-transferase gene family AT1G74590 47.321 8.87e-28 102.0
Dapi20g00850 . 85 217 Glutathione S-transferase gene family AT3G09270 33.083 2.33e-22 87.0
Dapi20g00838 . 5 223 Glutathione S-transferase gene family AT3G09270 41.892 9.25e-57 178.0
Dapi20g01117 . 5 217 Glutathione S-transferase gene family AT3G09270 42.723 3.51e-57 179.0
Dapi29g00404 . 2 219 Glutathione S-transferase gene family AT1G78380 64.679 2.07e-109 314.0
Dapi31g02288 . 66 132 Glutathione S-transferase gene family AT5G16710 36.765 8.97e-06 44.7
Dapi27g01201 DST 1 266 Glutathione S-transferase gene family AT1G77290 67.041 2.60e-138 388.0
Dapi27g00983 . 258 421 Glutathione S-transferase gene family AT5G41240 26.786 2.56e-11 62.8
Dapi7g02914 DST 82 223 Glutathione S-transferase gene family AT2G29480 33.803 2.72e-18 77.0
Dapi16g02007 . 4 217 Glutathione S-transferase gene family AT1G10370 44.954 2.12e-60 187.0
Dapi16g02008 . 4 217 Glutathione S-transferase gene family AT1G10370 32.71 4.38e-32 113.0
Dapi16g02010 . 4 217 Glutathione S-transferase gene family AT1G10370 44.186 5.75e-60 186.0
Dapi16g02011 . 4 217 Glutathione S-transferase gene family AT1G10370 29.439 6.61e-24 92.4
Dapi16g02012 . 6 217 Glutathione S-transferase gene family AT1G10370 44.601 1.08e-60 188.0
Dapi16g02127 . 3 215 Glutathione S-transferase gene family AT1G78380 64.651 2.12e-101 291.0
Dapi16g02128 . 4 215 Glutathione S-transferase gene family AT1G78380 59.259 1.63e-89 261.0
Dapi11g01176 DST 1 266 Glutathione S-transferase gene family AT1G77290 67.041 3.13e-138 388.0
Dapi15g02327 . 66 132 Glutathione S-transferase gene family AT5G16710 36.765 7.44e-06 45.1
Dapi25g01787 DST 11 229 Glutathione S-transferase gene family AT5G41210 60.274 1.14e-98 285.0
Dapi25g01792 DST 2 229 Glutathione S-transferase gene family AT5G41210 62.281 3.21e-107 307.0
Dapi25g01793 DST 11 238 Glutathione S-transferase gene family AT5G41210 64.035 1.82e-108 310.0
Dapi25g02220 DST 9 228 Glutathione S-transferase gene family AT5G02790 65.909 7.94e-102 303.0
Dapi32g00016 ACH,DST 1 209 Glutathione S-transferase gene family AT3G62760 47.17 1.18e-62 196.0
Dapi32g00017 ACH,DST 40 211 Glutathione S-transferase gene family AT4G02520 55.814 2.13e-59 182.0
Dapi14g02459 DST 3 211 Glutathione S-transferase gene family AT3G03190 50.0 4.25e-72 216.0
Dapi18g00102 . 8 218 Glutathione S-transferase gene family AT2G29420 44.091 1.23e-62 193.0
Dapi7g01071 DST,WGDA 8 220 Glutathione S-transferase gene family AT2G02390 58.685 8.01e-87 254.0
Dapi23g02145 . 5 220 Glutathione S-transferase gene family AT3G09270 49.554 2.02e-68 207.0
Dapi30g02437 DST 2 147 Glutathione S-transferase gene family AT3G62760 45.89 3.45e-42 138.0
Dapi1g01143 . 4 214 Glutathione S-transferase gene family AT1G78380 58.019 3.63e-90 263.0
Dapi4g01201 . 5 217 Glutathione S-transferase gene family AT3G09270 44.601 6.09e-60 186.0
Dapi4g00942 WGDA 123 217 Glutathione S-transferase gene family AT3G09270 36.842 4.81e-12 62.8
Dapi4g00941 . 5 223 Glutathione S-transferase gene family AT3G09270 42.342 1.58e-56 178.0
Dapi9g02084 DST 2 238 Glutathione S-transferase gene family AT5G41210 58.555 1.27e-108 312.0
Dapi9g02083 DST 2 229 Glutathione S-transferase gene family AT5G41210 62.281 7.48e-108 309.0
Dapi9g02077 DST 2 229 Glutathione S-transferase gene family AT5G41210 60.965 4.68e-104 299.0
Dapi9g01869 . 242 455 Glutathione S-transferase gene family AT5G41240 24.885 1.01e-11 61.6
Dapi4g00897 . 5 223 Glutathione S-transferase gene family AT3G09270 41.892 1.12e-56 178.0
Dapi4g00898 WGDA 41 217 Glutathione S-transferase gene family AT3G09270 37.853 8.66e-37 126.0
Dapi24g00567 DST 1 212 Glutathione S-transferase gene family AT1G75270 73.239 5.69e-116 327.0
Dapi12g00598 DST 1 219 Glutathione S-transferase gene family AT2G02390 57.589 6.43e-86 251.0
Dapi2g00101 . 8 218 Glutathione S-transferase gene family AT2G29420 45.0 2.09e-64 197.0
Dapi20g02042 . 1 211 Glutathione S-transferase gene family AT5G17220 51.185 2.31e-83 245.0
Dapi10g01758 . 3 216 Glutathione S-transferase gene family AT1G78380 48.387 2.20e-70 212.0
Dapi9g01765 . 9 144 Glutathione S-transferase gene family AT2G29420 47.794 2.25e-37 126.0
Dapi16g00956 . 7 221 Glutathione S-transferase gene family AT2G29420 48.372 1.65e-71 215.0
Dapi16g00955 . 7 220 Glutathione S-transferase gene family AT3G09270 50.0 6.07e-68 209.0
Dapi16g00954 . 7 202 Glutathione S-transferase gene family AT2G29420 42.857 7.33e-53 166.0
Dapi16g00953 . 5 220 Glutathione S-transferase gene family AT3G09270 50.917 7.54e-70 211.0
Dapi16g00020 ACH,DST 40 211 Glutathione S-transferase gene family AT4G02520 55.814 1.75e-59 182.0
Dapi16g00019 ACH,DST 1 209 Glutathione S-transferase gene family AT3G62760 48.341 3.61e-64 196.0
Dapi8g00743 DST 1 210 Glutathione S-transferase gene family AT1G75270 72.512 1.56e-113 321.0
Dapi9g02511 DST 12 235 Glutathione S-transferase gene family AT5G02790 62.5 9.20e-104 298.0
Dapi9g02510 . 9 237 Glutathione S-transferase gene family AT5G02780 63.043 2.21e-100 290.0
Dapi15g00043 . 360 455 Glutathione S-transferase gene family AT5G41240 30.208 2.68e-06 45.4
Dapi3g01238 DST,WGDA 1 258 Glutathione S-transferase gene family AT5G16710 61.338 9.90e-123 349.0
Dapi3g01295 DST,WGDA 9 211 Glutathione S-transferase gene family AT2G02390 53.202 8.02e-70 210.0
Dapi3g01296 DST,WGDA 5 213 Glutathione S-transferase gene family AT2G02390 54.245 6.99e-75 224.0
Dapi21g00845 . 262 471 Glutathione S-transferase gene family AT5G41240 28.139 1.86e-12 66.6
Dapi20g01812 ACH 3 203 Glutathione S-transferase gene family AT1G02930 59.901 2.51e-88 257.0
Dapi20g01811 ACH 3 154 Glutathione S-transferase gene family AT1G02920 57.895 7.05e-60 186.0
Dapi30g00238 DST 1 204 Glutathione S-transferase gene family AT2G30860 68.932 1.12e-106 304.0
Dapi30g00281 . 8 221 Glutathione S-transferase gene family AT2G29420 41.204 6.59e-51 163.0
Dapi30g00341 . 3 222 Glutathione S-transferase gene family AT1G10370 42.534 3.54e-56 176.0
Dapi30g00343 DST 1 209 Glutathione S-transferase gene family AT1G10370 40.952 1.27e-51 165.0
Dapi3g00163 DST,WGDA 9 235 Glutathione S-transferase gene family AT5G02790 69.163 1.12e-114 329.0
Dapi26g00175 . 3 217 Glutathione S-transferase gene family AT1G10370 47.442 1.67e-66 203.0
Dapi26g00170 DST 4 221 Glutathione S-transferase gene family AT1G10370 38.813 8.92e-50 160.0
Dapi26g00168 . 3 226 Glutathione S-transferase gene family AT1G59700 40.0 1.27e-50 163.0
Dapi28g00566 DST 1 219 Glutathione S-transferase gene family AT2G02390 64.865 3.19e-104 298.0
Dapi23g02492 DST 126 221 Glutathione S-transferase gene family AT1G59700 32.292 2.83e-10 53.9
Dapi32g00930 . 17 131 Glutathione S-transferase gene family AT2G29420 50.862 3.55e-40 131.0
Dapi32g00929 . 7 221 Glutathione S-transferase gene family AT2G29420 47.442 4.07e-70 212.0
Dapi32g00928 . 7 223 Glutathione S-transferase gene family AT3G09270 48.858 2.89e-66 202.0
Dapi32g00927 . 7 202 Glutathione S-transferase gene family AT2G29420 42.857 3.86e-53 167.0
Dapi32g00926 . 5 220 Glutathione S-transferase gene family AT3G09270 50.917 4.37e-70 211.0
Dapi23g01086 DST,WGDA 31 220 Glutathione S-transferase gene family AT2G02390 44.211 8.40e-50 160.0
Dapi23g01085 . 8 220 Glutathione S-transferase gene family AT2G02390 58.685 1.62e-87 256.0
Dapi14g00424 . 262 482 Glutathione S-transferase gene family AT5G41240 28.512 6.97e-12 65.5
Dapi14g00325 DST 1 209 Glutathione S-transferase gene family AT1G10370 40.952 1.27e-51 165.0
Dapi14g00323 . 138 225 Glutathione S-transferase gene family AT1G10370 40.909 1.75e-20 80.5
Dapi14g00321 . 3 222 Glutathione S-transferase gene family AT1G10370 42.534 3.54e-56 176.0
Dapi14g00263 . 8 221 Glutathione S-transferase gene family AT2G29420 41.204 6.59e-51 163.0
Dapi14g00226 DST 1 204 Glutathione S-transferase gene family AT2G30860 68.932 1.12e-106 304.0
Dapi19g00419 DST,WGDA 9 235 Glutathione S-transferase gene family AT5G02790 69.604 1.05e-114 329.0
Dapi26g01767 . 3 216 Glutathione S-transferase gene family AT1G78380 47.926 3.26e-70 212.0
Dapi17g01141 . 4 214 Glutathione S-transferase gene family AT1G78380 57.075 2.03e-88 258.0
Dapi15g00638 DST 5 219 Glutathione S-transferase gene family AT2G02390 50.233 4.84e-67 203.0
Dapi13g00401 . 2 216 Glutathione S-transferase gene family AT1G78380 65.581 3.33e-111 316.0