AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01817 ATGGATAACAAGGTAAAATCAGAAGATCAGTGTTCAAAGTGGTTTGAGTCTGAACAATCTTCTAATCCTATTGACTTTTTTGGAGAACCACAAAAATGTACTCGAATAGGAGAGAAGTATCAAGCACAAATCCCAGCTGGTCATTTTTTTATGAAAGAAAGCATAAAAAATGAAGAAAATAAATTCATAGGTACTGTAGAAAAAGAGGTTCAACTTCCTGCAGTCCCTATATTTGATAATGATGCTTTTTTGCTTGGTTTGTATATATTTGGCAAGAACTTTAATCTTGTGAACAAATTAATGGCTAACAAGAGAATGCCAGATGTATTATTTCACTATTATGGACAGTTTTATGGGGACAGTAAACGCAAAGAATGGTCAAGCAATTGGATGAACAGAAACCAAAGGAAGGTACCTGGAGTGAAGTTTTTCACAGATTGGAGGCTAGGGGAGCTTTTCAGTCGCATATTTCCGCTTGTCACTGATGAAAAAAAATGGCGTTTGACAAAGGCTACTAGACTGTTCGACAATAAAGAAATTTCATTTGAAACATATGTATTCAGTGTAATGGATATAGTGGAGATCAACTTGCTTGTAGAAGCCATTGCCATTGGAAAAGGAAAGAAAGATCTTACTAGAATGACCAAGAATCAGTCGAAAAACAAGAAGGTTTACGAACCATTCCCTTCTCTTCCACCGAATAAAGTTATCGATCTTTTGAAATTCGGGATTGAATTAAGTAAAGAGAAGTTAGCCGACCTATTCTGGGAAGCCGTCTGGCCTCGTCTTCTAGTGCGAGGATGGAACTCTCAGCGGCCAAGAAACTTTAATTTCAATAACTCCAAGAATTCATATGTGTATCTTGCACCTGGAGTCACAAAGTTTTCCCCAAGGGGACTGATTAAAGGAAAGCATTATTTTGCGTCTTTCAATGATGTTCTGGATAAAGTGGCTTCCGAGCCGGATCTTATTGATCTTGATCAGGACCAGGATGTGTTGGTGAAGCCAGTAGAAAAACAATGCTCTGATACAAAAGATTTAGTACGATATATGATTGTGGATTCCAGCTTAGAGTTTCTGGAGAATTGGGTTTCTAAAATCAGGTTAATGGAAAGTCTACCAAACTCTGAACTTAATGATCAAGAAGGTTCATCTCATGAAATTCAAAATCAGAACACGAATCAAAACGGTTTAGCGGATAGACTAGACATTGGTGAATCCAGAATTATCAACCAAGATATTGGTGGTACTGCTAATATAGATCAACAGTTTGAATTGGTTAGTGAAAGTCTAAGTACCCAATTGTCTGGAGGTCTTGTCAGGGCATCCAAATACCAGAACAAGAGGAAAAGAGATGTGGAAGAGGGGGCCGGCTCCCATATTCTTGCGGATAATGCTGTTGCTGTATGCAAAGAGCGGGATTATGTGATTATTTCCGCTTCGGAAAACAGACATCTATAG 1461 38.12 MDNKVKSEDQCSKWFESEQSSNPIDFFGEPQKCTRIGEKYQAQIPAGHFFMKESIKNEENKFIGTVEKEVQLPAVPIFDNDAFLLGLYIFGKNFNLVNKLMANKRMPDVLFHYYGQFYGDSKRKEWSSNWMNRNQRKVPGVKFFTDWRLGELFSRIFPLVTDEKKWRLTKATRLFDNKEISFETYVFSVMDIVEINLLVEAIAIGKGKKDLTRMTKNQSKNKKVYEPFPSLPPNKVIDLLKFGIELSKEKLADLFWEAVWPRLLVRGWNSQRPRNFNFNNSKNSYVYLAPGVTKFSPRGLIKGKHYFASFNDVLDKVASEPDLIDLDQDQDVLVKPVEKQCSDTKDLVRYMIVDSSLEFLENWVSKIRLMESLPNSELNDQEGSSHEIQNQNTNQNGLADRLDIGESRIINQDIGGTANIDQQFELVSESLSTQLSGGLVRASKYQNKRKRDVEEGAGSHILADNAVAVCKERDYVIISASENRHL 486
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01817 486 PANTHER ATROPHIN-RELATED 80 382 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
Dapi20g01817 486 MobiDBLite consensus disorder prediction 376 396 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01817 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr20:107867410 Dapi28g01391 Dapi-Chr28:92736089 dispersed
Dapi Dapi-Chr20:107835935 Dapi20g01817 Dapi-Chr20:107867410 tandem