Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dapi20g01819	ATGGTGTTCCTGTCAGCCATGAACACTCAAATAACATTATCTCGAACCGTTTCTTCAATATCATCACAATTTTCACCTCGTTTCGAGCTGCCGAAGAGCCGGTGCCTGTTCGTTCGCCCTTCGCGATATCCGAAACCGAATTCGAGAATCGTTTGCATGGCGGAGCCTTATCTGTTGAAGAAACTTGAATCGGCTGAGAAAACTTGGAAAGAGTTATCGGTTAAGTTAGCAGATCCTGATGTGGTTTCAAATCCTAGTGAGTACCAAAAGCTGGCGCAATCTATGTCTGAACTTGATGAGGTTGTAGCAACATATAGAGGATTCAAGGATTGTGAGAAACAACTTGAAGAGTCCAAAGTCTTGTCAAAAGATGCTGACATTGATGAAGAGATGGCTGAGATGATAGCTTCTGAAATTGAATCTTTATCTGACCAACTTTTAGTGTTTGAAGAAAAGCTTAAGATGTTGCTGATTCCAAGTGATCCTCTGGATTCTAGAAACATCTTGCTTGAAGTAAGGGCTGGGACAGGTGGCGAAGAGGCTGGTCTTTGGGCTGCTGACCTTGTTCGTATGTACCAGCGGTATTGTGAACGAAACTCATTGAGATACTCACCGCTTTCAGCCTCCGAGGCTGAAAGAGGAGGATACAAGACTTATGTTATGGAAGTTAAAGGTGCTAGGGTATATAGCAAACTGAAGTATGAATCCGGTGTCCATAGAGTTCAACGTGTTCCTCAGACAGAAGCCCAAGGTCGTATTCACACTTCAACTGCTACAGTGGCTATCATGCCAGAGGCTGAAGAGGTTGATGTGGTAATTGATCCAAAAGATATCGAACTTACAACTGCAAGATCTGGTGGTGCTGGAGGTCAGAATGTCAATAAGGTCGAAACAGCAGTCGATCTTTTCCACAAACCAACAGGAATCCGAATCTTTTGCACAGAAGAAAGGAGTCAACTTAAAAATAAAACGCGTGCCCTTCAGCTATTGCGTGCAAAACTGTATGAAATCAAACTAAAGGAACAACAAGAGTCTCAAAGAAATCAAAGAAAATCTCAGGTTGGTAGTGGCTCTCGTTCAGAAAAGATCCGCACATACAATTACAAGGACAATCGGGTCACTGATCACAGATTAAAGATGAACTTTGAGCTCACTTCATTTCTTGATGGTGACATTGAGACAGCCATTCAGTCTTGTGCTTCTATGGAGCAAAGGGAATTGCTAGAAGAGCTTGCAGATTCAGTAGGAACCGCAGCCCGATAA	1263	42.99	MVFLSAMNTQITLSRTVSSISSQFSPRFELPKSRCLFVRPSRYPKPNSRIVCMAEPYLLKKLESAEKTWKELSVKLADPDVVSNPSEYQKLAQSMSELDEVVATYRGFKDCEKQLEESKVLSKDADIDEEMAEMIASEIESLSDQLLVFEEKLKMLLIPSDPLDSRNILLEVRAGTGGEEAGLWAADLVRMYQRYCERNSLRYSPLSASEAERGGYKTYVMEVKGARVYSKLKYESGVHRVQRVPQTEAQGRIHTSTATVAIMPEAEEVDVVIDPKDIELTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKTRALQLLRAKLYEIKLKEQQESQRNQRKSQVGSGSRSEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAIQSCASMEQRELLEELADSVGTAAR	420

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dapi20g01819	420	Gene3D	-	276	339	-	-
	Dapi20g01819	420	ProSitePatterns	Prokaryotic-type class I peptide chain release factors signature.	284	300	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)
	Dapi20g01819	420	Gene3D	-	164	275	-	-
	Dapi20g01819	420	MobiDBLite	consensus disorder prediction	341	368	-	-
	Dapi20g01819	420	MobiDBLite	consensus disorder prediction	348	362	-	-
	Dapi20g01819	420	Gene3D	-	52	162	-	-
	Dapi20g01819	420	Hamap	Peptide chain release factor 1 [prfA].	58	412	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Dapi20g01819	420	FunFam	Peptide chain release factor 1	336	415	-	-
	Dapi20g01819	420	FunFam	Peptide chain release factor 1	266	361	-	-
	Dapi20g01819	420	PANTHER	LD18447P	56	414	IPR050057	GO:0009507(PANTHER)\|GO:0009658(PANTHER)\|GO:0010027(PANTHER)\|GO:0032544(PANTHER)
	Dapi20g01819	420	FunFam	Peptide chain release factor 1	164	274	-	-
	Dapi20g01819	420	NCBIfam	peptide chain release factor 1	54	412	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Dapi20g01819	420	Gene3D	-	340	415	-	-
	Dapi20g01819	420	Pfam	RF-1 domain	267	377	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)
	Dapi20g01819	420	SUPERFAMILY	Release factor	67	408	IPR045853	-
	Dapi20g01819	420	Pfam	PCRF domain	66	260	IPR005139	GO:0006415(InterPro)
	Dapi20g01819	420	SMART	PCRF-a-2	120	235	IPR005139	GO:0006415(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dapi20g01819	K02835	peptide chain release factor 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Dapi	Dapi-Chr16:4855133	Dapi20g01819	Dapi-Chr20:107949141	dispersed
	Dapi	Dapi-Chr20:107949141	Dapi2g02529	Dapi-Chr2:90725347	dispersed
	Dapi	Dapi-Chr20:107949141	Dapi32g00288	Dapi-Chr32:4697646	transposed