Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi20g01850 | ATGGCGAAAAAGCTAGTGAAATACTCCATAGTGAATGCATTTGCGGACACTGCATTTAAAGGAAATCCGGCGGTTATTGAGCTTTGTGGTCATGCAACTTTAGCAGCCGCACACTTTGTTTTCCGGTCTGGATTGGTGAATTCTAACATAATTGAATTCTCAACGATATCTGGAATGTTAACTGCCAAACGAATTCCGGATAATACAGTCAATGGTGAATTAGAAGACAGGTTCTACATAGAATTGGATTTCCCTTTGGTGCCGGTTTCAGATTTGAATGATGTTGAGGTTTCTGCAATTTCGGAAATGTTAAATGGTGTTTCTGTTGTTGATGTTCCAAAGAAGAGTGCAATTGATGACATCATTGTGGTGTTTTCATCACGAGAAGAAGTTGATTCTGTTTGTGGGAGTGCACATTGCGCCTTAGCAGCCTATTGGCATGAGAAGTTGGGGAAATGCAATTTTGTTGCATATCAGGCATCGCGTAGAAGTGGCGTATTACATATCCATATCGATAAGCAACATCAAAGAGTACTTCTTCGAGGTAAAGCCACCACAATCATGGAAGGGTCTCTTTTGGTCTAA | 585 | 40.68 | MAKKLVKYSIVNAFADTAFKGNPAVIELCGHATLAAAHFVFRSGLVNSNIIEFSTISGMLTAKRIPDNTVNGELEDRFYIELDFPLVPVSDLNDVEVSAISEMLNGVSVVDVPKKSAIDDIIVVFSSREEVDSVCGSAHCALAAYWHEKLGKCNFVAYQASRRSGVLHIHIDKQHQRVLLRGKATTIMEGSLLV | 194 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi20g01850 | 194 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 25 | 97 | - | - | |
| Dapi20g01850 | 194 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 98 | 182 | - | - | |
| Dapi20g01850 | 194 | SUPERFAMILY | Diaminopimelate epimerase-like | 7 | 193 | - | - | |
| Dapi20g01850 | 194 | PANTHER | PHENAZINE BIOSYNTHESIS PROTEIN | 26 | 132 | IPR003719 | GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER) | |
| Dapi20g01850 | 194 | Pfam | Phenazine biosynthesis-like protein | 26 | 131 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Dapi20g01850 | 194 | Pfam | Phenazine biosynthesis-like protein | 132 | 190 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi20g01850 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 260289 | Dapi20g01850 | Dapi4g01902 | |
| 264892 | Dapi4g01902 | Dapi20g01850 | |
| 385602 | Dapi20g01850 | Dapi4g01902 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:109173629 | Dapi20g01850 | Dapi-Chr20:109202673 | dispersed | |
| Dapi | Dapi-Chr20:109202673 | Dapi4g01903 | Dapi-Chr4:117482678 | dispersed | |
| Dapi | Dapi-Chr20:109195550 | Dapi20g01850 | Dapi-Chr20:109202673 | tandem | |
| Dapi | Dapi-Chr20:109202673 | Dapi20g01851 | Dapi-Chr20:109299004 | tandem |