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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01880 ATGTGTACGGAGAGTTTGGGAAGCGAAACCGGGAGTGATGTTAGTGAAAGTGGTGATGAGTTTTGTGTAATTTCAATGGAGGAGAGGGAGAGATTGAGAGCAATTCATCGGTCAAAGTGTCGGAACTTTGACCGGAAAGTCCGTAGGGTTGACTTTCCGCCACCGTTGACCTCGATCAGCAGCTCTGACGGCCCGGTCAAGGTCAACCACCATAGGGAAGGTGGGCGGTTGGTTATAAAAGCTGTTAGCTTTTCTAACTGCGGTACACATTTTCAAGCGGAACGTACAAACGGGAGGCTTCGGCTTTCGTTGTTGAGGGACCGGTTTGTAAATTATGAAAGTGGAAGGGTTGAAATGGAAGAGTATGAAGAAAGTGGTGACGTGGTGTCAGACGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGATGGTGGATGTGGCGGTGGTGGCGGATGAGGAAGAGGCGGAGGAGGGTGGTAGTGACGGCGGTTGGCGGTGGGATATGGACGGAAACCGGCGGCGGCTTGCCGGAAAAGGGGAGTTGAAAATGCTAACAAGGTGCAAGGAAGGCAATGGGAACAAAGTGTTCACAAATTGGAGCTCTTCTTGGGTTATTGGAATTTAA 624 50.96 MCTESLGSETGSDVSESGDEFCVISMEERERLRAIHRSKCRNFDRKVRRVDFPPPLTSISSSDGPVKVNHHREGGRLVIKAVSFSNCGTHFQAERTNGRLRLSLLRDRFVNYESGRVEMEEYEESGDVVSDEEEEEEEEEEEMVDVAVVADEEEAEEGGSDGGWRWDMDGNRRRLAGKGELKMLTRCKEGNGNKVFTNWSSSWVIGI 207
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01880 207 MobiDBLite consensus disorder prediction 124 143 - -
Dapi20g01880 207 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 1 201 IPR021410 -
Dapi20g01880 207 MobiDBLite consensus disorder prediction 120 143 - -
Dapi20g01880 207 Pfam Fantastic Four meristem regulator 51 104 IPR046431 -
Dapi20g01880 207 Coils Coil 119 142 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01880 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
78309 Dapi20g01880 Dapi7g02519
260308 Dapi20g01880 Dapi4g01931
264911 Dapi4g01931 Dapi20g01880
385629 Dapi20g01880 Dapi31g02030
385630 Dapi20g01880 Dapi4g01931
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr20:110382193 Dapi30g01705 Dapi-Chr30:76774744 dispersed
Dapi Dapi-Chr20:110382193 Dapi31g02030 Dapi-Chr31:100138979 wgd
Dapi Dapi-Chr20:110382193 Dapi4g01931 Dapi-Chr4:118365680 wgd
Dapi Dapi-Chr20:110382193 Dapi7g02519 Dapi-Chr7:110794431 wgd