AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi20g01885 ATGGCCTCTTTGACACGTGTCCTCCTTCCACAATTTCCCCAATGCACCAATTCTACCTGTTCCATTTCCATTAAGCTAAACCCTAGCGCTTCCAGAAGGCGATTCTCGGTTTTCTCCATGGCGGAATCCAACCGTACCACCGTCCTCGTCACCGGAGCCGGCGGCCGAACCGGTCAAATTGTTTATAAGAAGCTTAAGGAGAGGTCAGGGGAGTATATTGCACGAGGTTTGGTTAGAAGTGAGGAGAGTAAGGAGAAAATTGGCGGAGCCGATGACGTATTGATAGGAGATATAACGAACGCAGGAAGTCTTGTTCCGGCTATTGAAGGCACAGATGCTATTGTTATTCTTACCAGTGCAGTCCCGAAAATGAAACCTGGTTTTGATCCAACTAAAGGTGGAAGACCTGAATTCTATTTTGAAGAGGGATCGTTTCCTGAGCAAGTTGACTGGGAAGGGCAAAAGAATCAAATAGATGCCGCTAAAGCTGCTGGAGTGAAGCACATTGTCTGGAAGAGAAAGGCTGAACAGTATCTAGCAGATTCTGGGATTCCATACACGATTATAAGGT 571 46.58 MASLTRVLLPQFPQCTNSTCSISIKLNPSASRRRFSVFSMAESNRTTVLVTGAGGRTGQIVYKKLKERSGEYIARGLVRSEESKEKIGGADDVLIGDITNAGSLVPAIEGTDAIVILTSAVPKMKPGFDPTKGGRPEFYFEEGSFPEQVDWEGQKNQIDAAKAAGVKHIVWKRKAEQYLADSGIPYTIIR 190
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi20g01885 190 Pfam NAD(P)H-binding 52 171 IPR016040 -
Dapi20g01885 190 Gene3D - 43 190 - -
Dapi20g01885 190 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 169 190 IPR044163 GO:0009507(PANTHER)|GO:0016491(InterPro)
Dapi20g01885 190 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 190 IPR036291 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi20g01885 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
260313 Dapi20g01885 Dapi4g01940
264916 Dapi4g01940 Dapi20g01885
385636 Dapi20g01885 Dapi4g01940
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr20:110667899 Dapi4g00777 Dapi-Chr4:18483279 dispersed
Dapi Dapi-Chr20:110667899 Dapi4g01940 Dapi-Chr4:118631334 wgd