Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00046 | ATGGCAAGTACTCATCAGGGCATCCACGGCAATCTCCTTGAAATAACCGTTGTTAGCTGCTGTAAACTAAAGGACACGGAATGGATTTCACGGCAAGATCCTTACGTCTGTATCGAATACGGTAGCAGTAAATCGACCACTCGTACCTGTACAGATGGAGGCAAGAACCCTACGTTTCAAGAGAAGTTTGTTTTTACCCTTATTGAAGGATTGAGAGATCTGAATGTTTCGGTTTGGAATAGCAATACAGTTACACATGATGATTTCATCGGTGGTGGAAAGATTCCATTGGCAAAAGCTCTTTCTCAGGGATTTGATGATAGTAGCTGGCCGCTACAGAGTAATACTGGCAGGCACGCCGGAGAAGTCCGAATAATAATGCATTATACTAACGGAAATAAACCATCAAAAGATTCTGCTCAGAAACCATCAAAGGGTTTTACACCATCAGCATCGCCACATATACCTCCTATGGGGGCCATGTACCCTGCTGCACCCCCACCGGCTTATCCTCCACCAGGCGGGGCTTATCCTCCACCAGGCGGTGCTTATCCTCCACCCGGTGGTGCTTATCCTCCATCCTACGCAGCATATCCACATAATTCAGGTGGTTATCCACCGGCACCTTACCCACCTCAGCCGGTTACTTACCCTCCTCACTCCTATCCACCAAATCCAGCTTATGGATCACATTATCCCCCTGGTTCTCCATTCCCTGGAATGTATCCTCCTCCGCCGCCTTATTGA | 747 | 47.79 | MASTHQGIHGNLLEITVVSCCKLKDTEWISRQDPYVCIEYGSSKSTTRTCTDGGKNPTFQEKFVFTLIEGLRDLNVSVWNSNTVTHDDFIGGGKIPLAKALSQGFDDSSWPLQSNTGRHAGEVRIIMHYTNGNKPSKDSAQKPSKGFTPSASPHIPPMGAMYPAAPPPAYPPPGGAYPPPGGAYPPPGGAYPPSYAAYPHNSGGYPPAPYPPQPVTYPPHSYPPNPAYGSHYPPGSPFPGMYPPPPPY | 248 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00046 | 248 | PANTHER | CONSERVED SERINE PROLINE-RICH PROTEIN (AFU-ORTHOLOGUE AFUA-2G01790) | 4 | 248 | IPR052981 | - | |
| Dapi23g00046 | 248 | CDD | C2 | 13 | 110 | - | - | |
| Dapi23g00046 | 248 | MobiDBLite | consensus disorder prediction | 132 | 148 | - | - | |
| Dapi23g00046 | 248 | Pfam | C2 domain | 12 | 103 | IPR000008 | - | |
| Dapi23g00046 | 248 | MobiDBLite | consensus disorder prediction | 202 | 229 | - | - | |
| Dapi23g00046 | 248 | MobiDBLite | consensus disorder prediction | 131 | 153 | - | - | |
| Dapi23g00046 | 248 | ProSiteProfiles | C2 domain profile. | 1 | 111 | IPR000008 | - | |
| Dapi23g00046 | 248 | SUPERFAMILY | C2 domain (Calcium-lipid-binding domain, CaLB) | 8 | 131 | IPR035892 | - | |
| Dapi23g00046 | 248 | MobiDBLite | consensus disorder prediction | 204 | 229 | - | - | |
| Dapi23g00046 | 248 | Gene3D | C2 domain | 11 | 131 | IPR035892 | - | |
| Dapi23g00046 | 248 | SMART | C2-3c | 12 | 109 | IPR000008 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00046 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 73917 | Dapi12g01057 | Dapi23g00046 | |
| 76476 | Dapi18g00651 | Dapi23g00046 | |
| 79290 | Dapi23g00046 | Dapi28g00987 | |
| 79291 | Dapi23g00046 | Dapi2g00883 | |
| 251491 | Dapi7g00039 | Dapi23g00046 | |
| 386884 | Dapi23g00046 | Dapi7g00039 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:1392260 | Dapi28g00987 | Dapi-Chr28:81028599 | dispersed | |
| Dapi | Dapi-Chr18:14974153 | Dapi23g00046 | Dapi-Chr23:1392260 | wgd | |
| Dapi | Dapi-Chr2:20538846 | Dapi23g00046 | Dapi-Chr23:1392260 | wgd | |
| Dapi | Dapi-Chr23:1392260 | Dapi7g00039 | Dapi-Chr7:895493 | wgd |