Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00058 | ATGGCGATTTCCTCTTCTCAACTTAATAACTCCCAATTCGCATTACGATCTTCTTCCTTGTTTTCGTCTCCTCTGCCTCTGCCTCTGCAGCAGATTAATGGATTCTCGTTCCGCCCACTCAAAGTCAAAACGAAATCCCCTCTTCCAGTCCTCTCCATGCGACGCCAATCCAAAGCAACAGTGGTGACGGGGCAGTCATGGAGCACATCAGTTCTCGACAGCAAAACCCCAGTACTAGTCGAGTTCTATGCAAGCTGGTGCGGACCGTGCCAAATGGTGCACCGTGTGATCGTTGAGATTGCAGCAGAATATGCAGGGAAGGTCAACTGTTATGTGTTGAATGCTGACAAGGACCCGCGCATCACTGAGGAATATGACATTAAAGCGGTCCCAATAGTGGTTTTGTTCAAGAATGGTGAGAAATGTGAGTCAGTGGTTGGGACCATGCCTAAGGAGTTCTATGTGGCTGCCATTGAAAGGGTGTTGTCATCTTCATCTTGA | 501 | 48.3 | MAISSSQLNNSQFALRSSSLFSSPLPLPLQQINGFSFRPLKVKTKSPLPVLSMRRQSKATVVTGQSWSTSVLDSKTPVLVEFYASWCGPCQMVHRVIVEIAAEYAGKVNCYVLNADKDPRITEEYDIKAVPIVVLFKNGEKCESVVGTMPKEFYVAAIERVLSSSS | 166 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00058 | 166 | Gene3D | Glutaredoxin | 59 | 165 | - | - | |
| Dapi23g00058 | 166 | FunFam | Thioredoxin | 53 | 165 | - | - | |
| Dapi23g00058 | 166 | CDD | TRX-family | 70 | 159 | - | - | |
| Dapi23g00058 | 166 | Pfam | Thioredoxin | 60 | 158 | IPR013766 | - | |
| Dapi23g00058 | 166 | SUPERFAMILY | Thioredoxin-like | 52 | 163 | IPR036249 | - | |
| Dapi23g00058 | 166 | ProSitePatterns | Thioredoxin family active site. | 79 | 97 | IPR017937 | - | |
| Dapi23g00058 | 166 | ProSiteProfiles | Thioredoxin domain profile. | 42 | 163 | IPR013766 | - | |
| Dapi23g00058 | 166 | PRINTS | Thioredoxin family signature | 78 | 86 | - | - | |
| Dapi23g00058 | 166 | PRINTS | Thioredoxin family signature | 86 | 95 | - | - | |
| Dapi23g00058 | 166 | PRINTS | Thioredoxin family signature | 126 | 137 | - | - | |
| Dapi23g00058 | 166 | PANTHER | GEO12009P1 | 55 | 162 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00058 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 78923 | Dapi22g00587 | Dapi23g00058 | |
| 79299 | Dapi23g00058 | Dapi6g00833 | |
| 251498 | Dapi7g00049 | Dapi23g00058 | |
| 386891 | Dapi23g00058 | Dapi7g00049 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr13:114659913 | Dapi23g00058 | Dapi-Chr23:1602364 | dispersed | |
| Dapi | Dapi-Chr23:1602364 | Dapi23g00424 | Dapi-Chr23:9419824 | dispersed | |
| Dapi | Dapi-Chr22:9029903 | Dapi23g00058 | Dapi-Chr23:1602364 | wgd | |
| Dapi | Dapi-Chr23:1602364 | Dapi6g00833 | Dapi-Chr6:13290243 | wgd | |
| Dapi | Dapi-Chr23:1602364 | Dapi7g00049 | Dapi-Chr7:1090580 | wgd |