AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00090 ATGTGTGTCACACACTCCATTTCCATTTCCACCACCGCCAATTTCTCCGGCAACCAACAACGCTACCGCCGATTCGACATGGCCTCTGCAAAGCCTACCAGCCGATCGATCTCTCAACAAGCTTTCAACGAAATGGTTAAGGAAAACATAGACGATCTAGATATGGATCCAGCGGAAGCCCTAGCCGACGCAATCGAAACGCTAACTCTTCAAGGCGTAGATCTCTCCGGTATTGTTACCGATACACTCCCTGGAGAAACTAATATTGTGATTCAGTCACTTGATAGAATCAAACAGTTACAGTCCTCCGATTGGACTGATGAAGCCGTTGTAGATGAGGCGTTAGGTTTATTTGATACTTTAATTGCAATGTCTCGTGCCGACGGATCTGGAAACGCTGCAATTGCTACGAGAAATGGAGGCGTTGAGTTGATGTGTTCTGTTTGCTCGAAACTTAGCGCCGGTGGCCGTTATTCAGTACTTGTATTGGCTTTAGATGCGTTGGCTGCATTTCTTCATGATCTTCAAAGTACAGAAACTTTTAGGCAAAGTGGAGGACCAAGAATGTTGATTGAGATCCTAACCAAAGAAACTCAAAATGTGAATATCTTGAACAGTGGGTTTTCTGTTGTGGCTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCTTTTGTGGAATTACACATAGATGAATTAATGGTTGCAATTATGAAGAAATATACCAAAGGGAGCATTCCCAGTTTATATGATGCTATAAGAGTGCTTTTGGCTGCTGATGATAACCGTGTTGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAATTGGAATTGCCGAAGCTCTTGTGGAGGCATTGAATGATGGAATTAGCTCACCAAGTCTTGTATCAACAACCATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAAAATGGTGGTATAGATTCATTGCTCATTTGCATTGATGAATCTGGTGTGCAAGGGAATACAATTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCCATTGTTGAAAGAGGAGGGTTGAATAGACTCATTACACTCTCTAGCAGACTTGCTGATGACCCTTCCGTCCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATTCAATCGATGCAAAAGTTCCCTGACTCATATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCCAGGAATCCAGAAAACAGGCCTGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGTCACAAAAGTTGTAGAGATGCAGCCATTGCTGCTCTTAGAGACTTGGGGCTTGAAAACTACAACTCTTAG 1467 42.67 MCVTHSISISTTANFSGNQQRYRRFDMASAKPTSRSISQQAFNEMVKENIDDLDMDPAEALADAIETLTLQGVDLSGIVTDTLPGETNIVIQSLDRIKQLQSSDWTDEAVVDEALGLFDTLIAMSRADGSGNAAIATRNGGVELMCSVCSKLSAGGRYSVLVLALDALAAFLHDLQSTETFRQSGGPRMLIEILTKETQNVNILNSGFSVVAAASTGNEVIKESFVELHIDELMVAIMKKYTKGSIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKIGIAEALVEALNDGISSPSLVSTTIALKAVAVNDEICRSVAENGGIDSLLICIDESGVQGNTIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPDSYQLQKNSCLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAIAALRDLGLENYNS 488
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00090 488 Gene3D - 87 266 IPR011989 -
Dapi23g00090 488 SUPERFAMILY ARM repeat 98 479 IPR016024 -
Dapi23g00090 488 Gene3D - 267 485 IPR011989 -
Dapi23g00090 488 PANTHER UNCHARACTERIZED 32 482 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00090 K24166 armadillo repeat-containing protein 6
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Event-related genes

Select Gene_1 Gene_2 Event_name
251514 Dapi7g00071 Dapi23g00090
386907 Dapi23g00090 Dapi7g00071
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:1984051 Dapi7g00071 Dapi-Chr7:1374372 wgd