Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00103 | ATGGATACGTTGCAGCATATAATCGAAGAAGCAAAGCTTCGTACAGTGTGGTGGACGGTTTGTATATTCATCGTCACTTACTTCTTAACACACACAAGCAAATCAATGTGGATGAATGTTCCAATAGCAATTATGTTAATATCAGGTGTTCATATTTTAATTAGTGAAGTGGAATTCCATTGGAAAACTAGAAAACCTAATCAACAGTCATACTTATCTCACCTAGAGAGGAAACAGTTATCTGTGAATGATTCTCGCCTTTCCGTGTTGCAAACTAAGTGGAAGAGAAAGATTGATTCTCCGGTAGTTGAGGCTGCTATGGAGGATTTTGTTAACAAAATTTTGCAAGAATTTGTGGTGGATTTGTGGTATTCGGGTATAACACCTGATAAGGAAGCACCACAGCTGATTCATGAAATAATTATGGATATTTTTGCGGAGATTTCTATACGAGCTAAAGATATAAACCTTGTCGACTTGCTAACCAGGGATTTGGTTGATTTAGTAGGGGATCATTTGGAGCTTTTTAGGAAAAATCAAGATGTGATTGGGAGGGAGGTTATGGTGACATTATCTTCTGAAGAACGAGATGAAAGATTAAAACATCATCTGATGGCTTCTAAAGAGCTTCATCCGGCTTTGATGTCTTCAGAGAGTGAGTACAAGTTTCTTAAACGGATTATGGGGGCGGTTTTGGTTGCAGTCCTTAGACCTCGTGAAGCCCAATGCCCTTTAGTTCGGTGCATTGTGCGAGAGCTTTTAACTTGTTTGATAATGCAACCCGTGATGAGATTTGCAAGCCCTGGGCATATCAATGAATTGATTGAGGGTCTTTTCCTCGCCAACAATAATAAAGACGGAAGCGAGGCAGGTGATGATCGGTCAACTAATGCCACGGGTCAAAACCATAATCAGGGAAAAAGTCAATATGTGGCTTCTATGAAAGGCGACTCTTCTAGCACTCAAAAAAATAATAATGATCAAAATGGAACAGGTCTAGATGAGCTGTTGAACCCACAGTCCTTTGCTTGGGACCGGGGTCTTGAGGCTGCTACCCAAAGAAGATCAGAAGTCCTTCAGTCTGATAATCTCGAAAATATGTGGACCAAAGGAAGAAATTACAAAAAGAAAACTAAGCTTACAGACGGTGCTGGAATAAATAAAAATCATCAACAGCAAAATCTTGATGGTAGAATTTTGAGTGATCAAAGCAAGAGATCAAATCCTTCCGATTTAATTGATGGAAATTATTCTAATGTTGTTATTGGGAGTAAACCAAAACTGGAAAGCTCAAACAGTGTTTCTGATCAAATTCAAGTTGGTGGACCGATAATTTCTGAGTTCTATAGTGCTAATGTTGGTGGAGATAATGATGTACTTAATGTTAATCGTATTGTTTTTGATAAAGTAACACGTACTGAAGGATATGTTCCAAAGATCAGGTGTCGGGTTCTGGGAGCATACTTTGAGAATCTTGACTCAAAATCATTTGCAGTCTATTCCATTGCAGTGGCAGATGCTGATAACAAGACTTGGTTTGTGAAGAGAAGATACAGGAACTTTGAGAGATTGCATCGACACCTTAAAGACATTCCCAATTATACACTACATTTGCCTCCTAAAAGAATATTCTCATCCAGCACAGAGGACGCATTTGTTCATCAACGTTGTGTACAGCTTGATAAATATCTTCAAGATCTTTTGTCTATAGCTAATATTGCTGAGCAACATGAAGTATGGGACTTCTTGAGCATGTCTTCAAAGAGTTACTCTTTTGGAAGGTCATCATCGGTGGTGAGAACCTTAGCAGTGAATGTGGACGATACTGTAGATGATATCGTACGCCAATTCAAAGGGGTTTCCGGTGGTTTAAAGAAGAAAGTTTCTAGCCCGAGATTATCTTCTGAATCTTCTGCTTCATTTGCTAACAGAAACGTGTCATTCAAGGCTGATGAACTAACTGATTCGGTTACAAAGCTAACTACCTCGGATGTGGCTAACAGTTTTTCTCACAATAAAGGTGAAAAGGTAGGGAAATTTCACCTAGAGGAAGTAGGTTACACTGCACAAACTAATGAACGGAATTTGGAAAAAAGTGATGAACATAATGGAATTAGTTCAGAGCTTCGATCTGAAATACTCAGTCTTGCTGCGAATTTTCCGTCAACTTCTGGTCTTAAGGAAGATCCACTTGGTGTTCCAGCAGAGTGGACCCCAACTAATGTTTTTTGGATATCAAAGCAAATCTTGCAATTGATGATGGAAGATACTATTGATGACTGGCTTTTAAGGCAAATTCGTTTTCTCAGAAGAGATAATCTTGTTGCTCAAGGAGTTCACTGGGTCCAAGATATTCTTTGGCCTGAAGGAATATTCTTTCTGAAATTAAGAACAACTCAAACCGATTCTTCTCCGTCAAACGATCAGAGTTCTTGCAAAACTCCATCCGCCGGTAAAAACAATAAAGGGTCCTTTGAGGAGCAGCTAGAGGCAGCGCGTAGAGCTAGCGATATCAAAAAGATGATATTAACGGGAGCCCCGACTACATTGGTCAGCTTGATCGGACACAAACAATACGAGCGAAGTGCCAAAGACATTTATTATTTTCTCCAGTCTGCTGTGTGTTTGAAGCAACTTGGATACGGTTTACTTGAACTTATACTCATAACGGTTTTCCCAGAGCTGCGAGACATCATATCAAATATTCACGAGAAGAAACATGATCCGACGGTCTAG | 2736 | 39.47 | MDTLQHIIEEAKLRTVWWTVCIFIVTYFLTHTSKSMWMNVPIAIMLISGVHILISEVEFHWKTRKPNQQSYLSHLERKQLSVNDSRLSVLQTKWKRKIDSPVVEAAMEDFVNKILQEFVVDLWYSGITPDKEAPQLIHEIIMDIFAEISIRAKDINLVDLLTRDLVDLVGDHLELFRKNQDVIGREVMVTLSSEERDERLKHHLMASKELHPALMSSESEYKFLKRIMGAVLVAVLRPREAQCPLVRCIVRELLTCLIMQPVMRFASPGHINELIEGLFLANNNKDGSEAGDDRSTNATGQNHNQGKSQYVASMKGDSSSTQKNNNDQNGTGLDELLNPQSFAWDRGLEAATQRRSEVLQSDNLENMWTKGRNYKKKTKLTDGAGINKNHQQQNLDGRILSDQSKRSNPSDLIDGNYSNVVIGSKPKLESSNSVSDQIQVGGPIISEFYSANVGGDNDVLNVNRIVFDKVTRTEGYVPKIRCRVLGAYFENLDSKSFAVYSIAVADADNKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCVQLDKYLQDLLSIANIAEQHEVWDFLSMSSKSYSFGRSSSVVRTLAVNVDDTVDDIVRQFKGVSGGLKKKVSSPRLSSESSASFANRNVSFKADELTDSVTKLTTSDVANSFSHNKGEKVGKFHLEEVGYTAQTNERNLEKSDEHNGISSELRSEILSLAANFPSTSGLKEDPLGVPAEWTPTNVFWISKQILQLMMEDTIDDWLLRQIRFLRRDNLVAQGVHWVQDILWPEGIFFLKLRTTQTDSSPSNDQSSCKTPSAGKNNKGSFEEQLEAARRASDIKKMILTGAPTTLVSLIGHKQYERSAKDIYYFLQSAVCLKQLGYGLLELILITVFPELRDIISNIHEKKHDPTV | 911 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00103 | 911 | PANTHER | PX SERINE-THREONINE KINASE PXK | 4 | 907 | IPR051837 | - | |
| Dapi23g00103 | 911 | Pfam | Sorting nexin C terminal | 737 | 872 | IPR013937 | - | |
| Dapi23g00103 | 911 | SMART | PX-2 | 476 | 586 | IPR001683 | GO:0035091(InterPro) | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 802 | 823 | - | - | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 384 | 415 | - | - | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 375 | 415 | - | - | |
| Dapi23g00103 | 911 | SMART | PXA-3 | 100 | 283 | IPR003114 | - | |
| Dapi23g00103 | 911 | ProSiteProfiles | PXA domain profile. | 100 | 283 | IPR003114 | - | |
| Dapi23g00103 | 911 | Pfam | PX domain | 508 | 584 | IPR001683 | GO:0035091(InterPro) | |
| Dapi23g00103 | 911 | Pfam | PXA domain | 100 | 277 | IPR003114 | - | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 286 | 336 | - | - | |
| Dapi23g00103 | 911 | CDD | PX-SNX19-like-plant | 480 | 584 | - | - | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 802 | 824 | - | - | |
| Dapi23g00103 | 911 | MobiDBLite | consensus disorder prediction | 293 | 336 | - | - | |
| Dapi23g00103 | 911 | SUPERFAMILY | PX domain | 480 | 587 | IPR036871 | GO:0035091(InterPro) | |
| Dapi23g00103 | 911 | Gene3D | - | 481 | 594 | IPR036871 | GO:0035091(InterPro) | |
| Dapi23g00103 | 911 | ProSiteProfiles | PX domain profile. | 478 | 590 | IPR001683 | GO:0035091(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00103 | K17925 | sorting nexin-13 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 79310 | Dapi23g00103 | Dapi2g00813 | |
| 251518 | Dapi7g00081 | Dapi23g00103 | |
| 386911 | Dapi23g00103 | Dapi7g00081 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:2130061 | Dapi2g00813 | Dapi-Chr2:18456281 | dispersed | |
| Dapi | Dapi-Chr23:2130061 | Dapi7g00081 | Dapi-Chr7:1544027 | wgd |