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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00130 ATGTCTAAACGGACTCTTCATAATATTGCTCAGATGAATTTTCAAGTAAGTTTTCTAACTGGTTATCTCATTGTAGCATTACTTGTATCATCATCATCATCATTTGCAGCCCGTTGCGAATCCTCCATTCCGATGACGAATCTTGATGCCGGTGATCAAAATCAGGAATCTTTATATTTAGAAGACAATCAAAGTACTTCAAAGAGGGATGATATAATTCACGAGAGGCTGCTAAGGGCAAATACGAAAGATTATGGACGATCAGATCCTGCACCAACGTTCGCGAAGCCCCCGTTTAAACTCATACCAAACTAG 315 39.37 MSKRTLHNIAQMNFQVSFLTGYLIVALLVSSSSSFAARCESSIPMTNLDAGDQNQESLYLEDNQSTSKRDDIIHERLLRANTKDYGRSDPAPTFAKPPFKLIPN 104
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00130 104 MobiDBLite consensus disorder prediction 46 104 - -
Dapi23g00130 104 MobiDBLite consensus disorder prediction 46 62 - -
Dapi23g00130 104 MobiDBLite consensus disorder prediction 63 83 - -
Dapi23g00130 104 PANTHER PROTEIN CASPARIAN STRIP INTEGRITY FACTOR 1-RELATED 15 104 IPR038974 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00130 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251536 Dapi7g00106 Dapi23g00130
386929 Dapi23g00130 Dapi7g00106
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr16:79679194 Dapi23g00130 Dapi-Chr23:2688273 wgd
Dapi Dapi-Chr23:2688273 Dapi7g00106 Dapi-Chr7:2048595 wgd