AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00174 ATGCCTACAAAAGGCTCCATCGAAAACCGCCAACTCATCAGCTCGATCGGTACTACGAAGAGAATCGCTCGATCCAATGCGATTAAGTTTAAACCTGTTCGATTCAACGTTCGAGCGTCAGGTGCAACAACAGTTGGTGTACAGCCTGGTGAAACGAAGACAAAAGACAATGAGAAAGATGAGAATCTCATATTTGTTGCAGGAGCAACCGGCAAAGTTGGTTCACGAACAGTAAGGGAGCTTTTGAAGCTAGGGTTTAATGTTCGAGCTGGTGTACGGAGTACTCAGAGAGCAGAATCTTTGGTGAAGAGCGTGCAGCAGATGAAGCTTGATGACGCGTTATCTGGTGGAAGTCAGCCTATAGAGAAGCTTCAACTTGTGGAATGTGATTTGGAGAAACCAGAGCAAATTAAGGCAGCGTTGGGCAATTCTTCAACAGTTATATGTTGCATTGGGGCTAGTGAGAAGGAAATATTTGATGTTACTGGGCCCTATCGAATTGACTTTCAAGCCACCAAAAACCTTATTGATGCAGCTGCTGCTGCAAAAGCAAAGCACTTTATTTTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTTTGGGGCGTCCTATGTTGGAAAAGGAAGGCTGAAGAAGCACTGCTTGCTAGTGGGATTCCTTACACTATAGTGAGACCTGGAGGCATGGAACGTCCTACTGATTCCTTCAAGGAAACACATAATCTTACCCTCTCTCCAGGAGATACTTTATTTGGTGGTCTAGTTTCAAATTTACAGGTGGCAGAACTCCTTGCGTTTATGGCTAAAAACCCCAATCTTTCATATTGTAAAGTAGTGGAAGTGGTTGCGGAAACAACAGCACCATTGACCCCCATGGGCGACCTGCTAACAAAAATTCCACCTCAACGCGCCATACCTTACCAACCTAAGGAACCTGAAGCTATCAAAGAACCCGAACCTGTTTCTAAAAGCACCATATCTGAGAGTTCTAGCATTGCCACTGAAACACAATCTCTGTCAAAAACTGCTTCCACACAACCGCTTTCCCCATATACTGCCTATGAAGGTTTGAAACCCCCTACATCCCCAACTCCATTGCCACCTGGCGGCAGTAAGGCGGTGGTTGAAGCAGTATCAGCTCCTTCTACTGATCCTGAAACCATCACAAAATTGGAAACAGTTACTATTACAACTGAACCTGCACCAGTGGCTGTAGGATTGCAGAAAACCAGACCTCTCTCTCCTTATACTGCTTATGAGAACCTGAAACCACCTTCCTCTCCAACCCCAACACCAAGTGGATTCAAACAGACACCATCTTATTCTTCTACACACCTTTCTAGTGACTTAATTTATGAAAATCTGAAGCCTCCTACTTCACCATGTCCAAGTACCCCATCGGTATCACCACCACCAACTTCCCTTGTAGACAACGGGTCTCCTATTGCTTCCACACCCGAAGACACCTCCGTTCACTCAACAGTGAAACCTAGGCCACTTTCACCGTACCCGATGTATGAAAACTTGAAGCCTCCAAGTTCTCCTACTCCTTCCGCTCCTTAA 1587 45.12 MPTKGSIENRQLISSIGTTKRIARSNAIKFKPVRFNVRASGATTVGVQPGETKTKDNEKDENLIFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQMKLDDALSGGSQPIEKLQLVECDLEKPEQIKAALGNSSTVICCIGASEKEIFDVTGPYRIDFQATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLSPGDTLFGGLVSNLQVAELLAFMAKNPNLSYCKVVEVVAETTAPLTPMGDLLTKIPPQRAIPYQPKEPEAIKEPEPVSKSTISESSSIATETQSLSKTASTQPLSPYTAYEGLKPPTSPTPLPPGGSKAVVEAVSAPSTDPETITKLETVTITTEPAPVAVGLQKTRPLSPYTAYENLKPPSSPTPTPSGFKQTPSYSSTHLSSDLIYENLKPPTSPCPSTPSVSPPPTSLVDNGSPIASTPEDTSVHSTVKPRPLSPYPMYENLKPPSSPTPSAP 528
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00174 528 MobiDBLite consensus disorder prediction 441 462 - -
Dapi23g00174 528 FunFam Protein TIC 62, chloroplastic 60 310 - -
Dapi23g00174 528 MobiDBLite consensus disorder prediction 512 528 - -
Dapi23g00174 528 MobiDBLite consensus disorder prediction 330 359 - -
Dapi23g00174 528 CDD SDR-a5 64 293 - -
Dapi23g00174 528 Gene3D - 60 307 - -
Dapi23g00174 528 MobiDBLite consensus disorder prediction 409 528 - -
Dapi23g00174 528 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 18 527 IPR044719 -
Dapi23g00174 528 MobiDBLite consensus disorder prediction 479 504 - -
Dapi23g00174 528 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 63 291 IPR036291 -
Dapi23g00174 528 MobiDBLite consensus disorder prediction 318 381 - -
Dapi23g00174 528 Pfam NAD(P)H-binding 68 279 IPR016040 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00174 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251564 Dapi7g00158 Dapi23g00174
386957 Dapi23g00174 Dapi7g00158
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:3739152 Dapi4g01940 Dapi-Chr4:118631334 dispersed
Dapi Dapi-Chr23:3739152 Dapi7g00158 Dapi-Chr7:3229169 wgd