AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00190 ATGATCTACCCGTTTTTCGCCGTTCTGTTCGTCGAAATGTTAACGATTCTGTTACTGTTATTCAAAACTCCATTCCGAAAGCTTTTAATAATCGGAATAGATCGTGCTAAACGTGGAAGAGCTCCGCTGGTTGTGAAGTCCGTCGGCGCCACCGTTTTCGTAATCATGATGTACAACGTTTACAGTGTAACGGAAATCCAGAGCCGTCCGGTTGACGCCGTTAACCCTACCGATCAAATCATCCTCGCTTACCACATGCTTGAGGCTTCTCTTATGGGATTCTCCCTCTTCCTAGCCCTAATGATTGATAGACTACATCATTACATAAGAGAACTTCGAATACTTAGAAAAACCATGGAAGTTGCAAAGAAACAAAACAGAGCAGCAGAAGAAACCAAGAACAAAGGTGTAGATGAGGCCAAAATCCTGAATGATGAATTATCTAAATTGAGAACACATATTCAAAAACTGGAATCTGAACATGAATCAAAGGAAAAGGAGATCAAATCTGCAGAAGCTAATTCACTGGCTCTCAAGAACCAATCAGAAGGCTTTCTTCTTGAGTATGACCGTTTGTTAGCAGAAAACCAGAATCTTAGAGATCAACTGCGGGCCTTTGATGAAAGTGCGGTTTTTTCTAGTGGAAAGAAGAATATGTGA 660 41.06 MIYPFFAVLFVEMLTILLLLFKTPFRKLLIIGIDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPVDAVNPTDQIILAYHMLEASLMGFSLFLALMIDRLHHYIRELRILRKTMEVAKKQNRAAEETKNKGVDEAKILNDELSKLRTHIQKLESEHESKEKEIKSAEANSLALKNQSEGFLLEYDRLLAENQNLRDQLRAFDESAVFSSGKKNM 219
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00190 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Dapi23g00190 219 Coils Coil 105 135 - -
Dapi23g00190 219 Coils Coil 140 181 - -
Dapi23g00190 219 Coils Coil 189 209 - -
Dapi23g00190 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 5 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Dapi23g00190 219 Gene3D - 136 199 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00190 K14009 B-cell receptor-associated protein 31
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
76536 Dapi18g00834 Dapi23g00190
79334 Dapi23g00190 Dapi2g00687
251573 Dapi7g00170 Dapi23g00190
386966 Dapi23g00190 Dapi7g00170
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr17:29127922 Dapi23g00190 Dapi-Chr23:3920373 dispersed
Dapi Dapi-Chr1:29069209 Dapi23g00190 Dapi-Chr23:3920373 dispersed
Dapi Dapi-Chr23:3920373 Dapi7g02367 Dapi-Chr7:108305431 dispersed
Dapi Dapi-Chr18:20960137 Dapi23g00190 Dapi-Chr23:3920373 wgd
Dapi Dapi-Chr2:13376564 Dapi23g00190 Dapi-Chr23:3920373 wgd
Dapi Dapi-Chr23:3920373 Dapi7g00170 Dapi-Chr7:3378282 wgd