AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00193 | ATGGGTAGTCTATTCAAAGCAAGCTCGCTCTTATTGTTCATATGGTTTCTTCTCTCACCTACTGCATATTCGGGCCCTAATGATGGATTGGTTAGAGTTGGACTTAAGAAGAGGAAAATCAACCAATTGAATCGAATTGGATATGTTGGATCTAATGAAGGGGATGCTAGAAGAAATTATGATGTTCATGGTAGTTTTAGGGATTCAGGTAGTGATGCTATTGCTCTAAACAATTACATGGATGCTCAATATTATGGTGAGATTGGTATTGGTACTCCACCTCAAAAGTTCACTGTGATTTTTGACACGGGTAGTTCTAATCTGTGGGTGCCTTCCGCAAAGTGCTACTTCTCAGTAGCCTGCCTTCTTCACCCAAAGTATAAGTCTAGCCAGTCAAGTTCCTATAAGAAAAATGGGAAATCTGCAGCAATTCATTATGGAACTGGCTCTGTCTCTGGTTTTTTTAGCCAAGATGTTATCAAACTTGGTGATCTTGCTGTGAAAGCGCAAGATTTCATAGAGGCAACTAGAGAGCCTGGTATCACTTTCGTAGCAGCCAAGTTTGATGGTATACTTGGCCTTGGGTTTCAAGAAATCTCTGTCGGGGGTGCTGTTCCTGTTTGGTACAACATGGTGAAACAAAGTCTTGTTCATGAACCTGTATTTTCATTTTGGCTTAATCGAAATACTGATGAGGACGAAGGGGGTGAACTTGTGTTTGGTGGGGTTGACACAAATCACTTCAAGGGTGAACACACATATGTCCCTGTAACTCAGAAAGGCTATTGGCAGTTTGAAATGGGTGATGTCTTGATTGGTGGTAAATCAACTGGATTTTGCGCCAAAGGTTGTGCAGCAATTGCTGATTCTGGAACCTCTTTGCTGGCTGGGCCAACGGATGTTATTACTCAAATCAATCAAGCCATTGGTGCTGCTGGTATTATGAGCCGACAATGCAAGACATTCGTTGATCAGTATGGAAAAACTATAATTGAGATGCTACTTTCTCAGACACGGCCTGAAAAAATCTGCTCTCAAATGAAGTTCTGCTCCTTTGATGGTTCTCGTGATACAAGCATGATAATTGAGAGCGTGGTTGACAAGAATAATGGAAAATCATCTGGTGTACATGATGAGATGTGTAGTCTCTGTGAGACGGCTGTTGTTTGGATGGAAAACAAAATAGGACGAAATGAAACTCAAGAAGAGATAATTAACCATATTGATCAGCTGTGTGAACGGTTGCCAAGTCCAATGGGAGAATCCGGAGTCAATTGCAACAGTCTTTCATCCATGCCCAATATTGCTTTTACCATTGGTTGTAAAACTTTTAGTCTCTCCCCTAAAGAGTATATCCTGAAAGTCGGTGAGGGAGTAACAGCACAATGCATCAGTGGATTTACTGCTCTTGATGTGGCACCTCCTCATGGGCCCCTATGGATCCTGGGAGATATCTTTATGGGTAAATACCATACGGTGTTTGACTATGGTAAATCACGAGTCGGGTTCGCAGAAGCTGTTTGA | 1524 | 41.86 | MGSLFKASSLLLFIWFLLSPTAYSGPNDGLVRVGLKKRKINQLNRIGYVGSNEGDARRNYDVHGSFRDSGSDAIALNNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSAKCYFSVACLLHPKYKSSQSSSYKKNGKSAAIHYGTGSVSGFFSQDVIKLGDLAVKAQDFIEATREPGITFVAAKFDGILGLGFQEISVGGAVPVWYNMVKQSLVHEPVFSFWLNRNTDEDEGGELVFGGVDTNHFKGEHTYVPVTQKGYWQFEMGDVLIGGKSTGFCAKGCAAIADSGTSLLAGPTDVITQINQAIGAAGIMSRQCKTFVDQYGKTIIEMLLSQTRPEKICSQMKFCSFDGSRDTSMIIESVVDKNNGKSSGVHDEMCSLCETAVVWMENKIGRNETQEEIINHIDQLCERLPSPMGESGVNCNSLSSMPNIAFTIGCKTFSLSPKEYILKVGEGVTAQCISGFTALDVAPPHGPLWILGDIFMGKYHTVFDYGKSRVGFAEAV | 507 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00193 | 507 | Gene3D | Acid Proteases | 31 | 242 | IPR021109 | - | |
| Dapi23g00193 | 507 | FunFam | Lysosomal aspartic protease | 70 | 312 | - | - | |
| Dapi23g00193 | 507 | Gene3D | Acid Proteases | 243 | 506 | IPR021109 | - | |
| Dapi23g00193 | 507 | ProSiteProfiles | Saposin B type domain profile. | 314 | 354 | IPR008139 | - | |
| Dapi23g00193 | 507 | FunFam | Vacuolar aspartic proteinase | 397 | 506 | - | - | |
| Dapi23g00193 | 507 | Pfam | Saposin-like type B, region 2 | 318 | 350 | IPR008138 | - | |
| Dapi23g00193 | 507 | ProSiteProfiles | Peptidase family A1 domain profile. | 84 | 504 | IPR033121 | - | |
| Dapi23g00193 | 507 | PANTHER | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED | 27 | 506 | IPR001461 | GO:0004190(InterPro)|GO:0004190(PANTHER)|GO:0006508(InterPro)|GO:0006508(PANTHER) | |
| Dapi23g00193 | 507 | SUPERFAMILY | Acid proteases | 11 | 506 | IPR021109 | - | |
| Dapi23g00193 | 507 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 286 | 297 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | CDD | phytepsin | 74 | 505 | IPR033869 | GO:0004190(InterPro) | |
| Dapi23g00193 | 507 | Gene3D | - | 314 | 416 | - | - | |
| Dapi23g00193 | 507 | SMART | sapb-4 | 278 | 350 | IPR008139 | - | |
| Dapi23g00193 | 507 | Pfam | Saposin-like type B, region 1 | 380 | 416 | IPR007856 | GO:0006629(InterPro) | |
| Dapi23g00193 | 507 | ProSitePatterns | Eukaryotic and viral aspartyl proteases active site. | 99 | 110 | IPR001969 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | Pfam | Eukaryotic aspartyl protease | 83 | 506 | IPR033121 | - | |
| Dapi23g00193 | 507 | SUPERFAMILY | Saposin | 315 | 416 | IPR011001 | - | |
| Dapi23g00193 | 507 | PRINTS | Pepsin (A1) aspartic protease family signature | 480 | 495 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | PRINTS | Pepsin (A1) aspartic protease family signature | 90 | 110 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | PRINTS | Pepsin (A1) aspartic protease family signature | 286 | 297 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | PRINTS | Pepsin (A1) aspartic protease family signature | 236 | 249 | IPR001461 | GO:0004190(InterPro)|GO:0006508(InterPro) | |
| Dapi23g00193 | 507 | ProSiteProfiles | Saposin B type domain profile. | 377 | 418 | IPR008139 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00193 | K08245 | phytepsin [EC:3.4.23.40] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 73997 | Dapi12g01254 | Dapi23g00193 | |
| 251574 | Dapi7g00172 | Dapi23g00193 | |
| 256733 | Dapi23g00193 | Dapi16g02000 | |
| 381680 | Dapi16g02000 | Dapi23g00193 | |
| 386967 | Dapi23g00193 | Dapi7g00172 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr20:93549192 | Dapi23g00193 | Dapi-Chr23:3982337 | dispersed | |
| Dapi | Dapi-Chr23:3982337 | Dapi7g01102 | Dapi-Chr7:38030354 | dispersed | |
| Dapi | Dapi-Chr12:93547207 | Dapi23g00193 | Dapi-Chr23:3982337 | wgd | |
| Dapi | Dapi-Chr16:78261592 | Dapi23g00193 | Dapi-Chr23:3982337 | wgd | |
| Dapi | Dapi-Chr23:3982337 | Dapi28g01178 | Dapi-Chr28:88292935 | wgd | |
| Dapi | Dapi-Chr23:3982337 | Dapi7g00172 | Dapi-Chr7:3415075 | wgd |