AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00199 ATGACGCCGAAGAAGAGATTTGTGAATGCTGCTCTGAGACGCCGTATCTCGCCGTTCGTTTCAAAGTTTTTGATCTTATTATTGATATTATTGTGCCTCGTCGTGTTTTTCGGATTATTCTCTCAATTTAGCCTTCGATCGGCGTCTAGCGCCACTGATTTTGGCTTTGATGAACTGCGTACGGAAGGTTTTCGGATGAAGATTGCTTTCCTTTATCTTGTTCGTGATAATCTTCCTCTTGATTTCCTCTGGCATAACTTCTTTAAGAATGCAGATCCTGAGAAATTCGCAATTTACATACACTCGAAGCCTGGTTTTGTGTTCGATGCGTCATCTACCAGATCAGTGTTTTTCTACAACCGACAGTTGGAAAACAGTGTTGAGGTGGGTTGGGGTAAGCCAACTATGATTCAAGCAGAAAAGCTGCTGTTCAAGGCAGCCCTTGGTGATCCACACAATCATATATTTGTTCTTCTCTCTGACAGTTGTGTCCCGCTATATAATTTCAGCTACATATACACATATTTAATGTCATCTTCAAGAAGTTTTGTTGACAGCTTTATTGACGCCAAGGAAAAACGTTATAATCCAGAGATGTCTCCCGACATACCTGAAGAAAAATGGCGGAAAGGATCCCAGTGGATCACATTGGTCAGAAGGCATGCGGAGGTGGTTGCATATGATCATGTTGTTTTCCCAGTATTTAACAAACATTGCAAGCGGCGGCCGCTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTATTGAGCAGCAGCAACACAATTGCATCCCAGATGAACATTATGTCCCCACCTTACTTTCAATGGGGGGATTTGAAGATACTTTGGTGAGAAGAACATTGACTTATTCTTTATGGAACCAGTCTACTGAAACGATGAATACACAAGCTTGGCACCCTGTAACATTTAGTTATGCAAGTGCTAGCCGGAAAAACATTCAAGATATTAAGGATATTGACCATATTTATTTCAATTCTGAGAACCGGACCGAATGGTGTGGGCATGATGCTGAAGCCAGCAGCAGACCGTGTTACTTATTTGCAAGGAAGTTCACTCGCGGAGCAGCCATGCGCCTTTTGACAAACGGTGTGGTGGGTCCATATGATTCCGACACGTTGTTTCTAGAACGAATATAG 1155 42.6 MTPKKRFVNAALRRRISPFVSKFLILLLILLCLVVFFGLFSQFSLRSASSATDFGFDELRTEGFRMKIAFLYLVRDNLPLDFLWHNFFKNADPEKFAIYIHSKPGFVFDASSTRSVFFYNRQLENSVEVGWGKPTMIQAEKLLFKAALGDPHNHIFVLLSDSCVPLYNFSYIYTYLMSSSRSFVDSFIDAKEKRYNPEMSPDIPEEKWRKGSQWITLVRRHAEVVAYDHVVFPVFNKHCKRRPLLDLSKGNESLIEQQQHNCIPDEHYVPTLLSMGGFEDTLVRRTLTYSLWNQSTETMNTQAWHPVTFSYASASRKNIQDIKDIDHIYFNSENRTEWCGHDAEASSRPCYLFARKFTRGAAMRLLTNGVVGPYDSDTLFLERI 384
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00199 384 PANTHER CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 37 366 IPR044174 GO:0016757(InterPro)
Dapi23g00199 384 Pfam Core-2-I-Branching enzyme 68 322 IPR003406 GO:0016020(InterPro)|GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00199 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr10:21231220 Dapi23g00199 Dapi-Chr23:4087924 dispersed
Dapi Dapi-Chr23:4087924 Dapi23g02856 Dapi-Chr23:119618433 dispersed
Dapi Dapi-Chr23:4087924 Dapi23g00201 Dapi-Chr23:4115294 proximal
Dapi Dapi-Chr23:4087924 Dapi7g00178 Dapi-Chr7:3567183 wgd