Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00220 | ATGTCACCAGTAATCATATACCCAATTCTTATATTATCCCTACTTATTATTCCCCCAAACCCAACCGCCGCCGATCAATCATCCATCTCAGTCCTCATAACCCAAACCGGCCTTGATTTCGTCAAGAATTTGCTTGTAACAAAAGCTATTTCTAAAATCACTCCAACCCCAATTTCTGGAATTGACAAGGCTGTTGAAATTCCTCTAATTGGTAAAGTTCATATTGTTCTTTCGAACATTACTATTTACCGGTTCGATGTCGGGTTGTCGCAGGTTATACCCAATGCTGCAGGTGTCTCTGTTGCTGGGTCAGATGTTACTTGTGATTTGAATGTGAATTGGCATTATGCTTATGGTTCTTCCCTTTTTCCTATTTCGGTTTCGGATACTGGGACTGCTTCTGTTCAGGTTAATGGCCTGGAAATGGGGGCGGCGTTGGGCTTGAATGTTACAGAAGGATCTATAAAACTTTCCACCATTGAATGCAATTCTCATATAGATGATATTTCCATAGACCTAGATGGAGGTTCATCTTGGCTCTATCAAGGGATTCTGGATGCTTTCAAAGAAGAAATAGTGTCAACAGTAGAAAAAACAATCACCAAAACACTAAAAACCGAGATTTCAAAGCTTGGATCTATTCTACAAAGTCTTCCGAAACAAATTCCAGTCGATGACGTGGCATCATTAAACGTTACACTTGTTAACAACCCTTTTCTAAGTGACACTTCATTAGGGTTTGAGATAAACGGGTTATTCATAGAAAATAAACCCGGCACACATTCTTACAGAAACAGTTTGCAGCCACCTGTCCATTGTTCAGATCCTTCAAAAATGATTGGAATTGCCCTAGATGAAGCTGTGTTCAAATCTGCATTTTCCTTATATTACAATGCTATGTTTATGCATTGGACTGTGGATAAACTTCCTGAACAATCTCTTTTGAACACAGCAGGGTGGAGATTTATTATTCCTCAACTCTACAAAAAATACCCAAATGATGATATGAGTTTAAATCTCTCTTTATCTGATCCACCAGTTGTGCAGATATCACAGCAGAAAATTGATGCTACTATTTATGCAGATTTTATTATAGATGTTCTTGAAGGGGTTGACACAGTACCTGTTGCTTGTATCTCATTGATCATTTCTAGCTCGGGTTCAGTTCAAATTACCGGAAATAACATTACGGCTCATTTGAAAATGGATGATTTATCCATGTCATTGAAATGGAGCAAGATTGGCACATTGCACATGTTTCTAATTCAGCCGGTGGTGTGGACGATGATTGAAACTGTTTTCGTACCATATGTGAATGCACGAATTGGGCTTGGGTTCCCTTTGCCTCTAATTAACGGGTTTATGCTTCGAAATGCTGAGATAATAACCTCGGATTCGAGAATCACTGTTTGCGGTGATGTTACGTACGAGGAATCATTTGGTGGGACACAAATCTACGATTCGTAG | 1467 | 39.2 | MSPVIIYPILILSLLIIPPNPTAADQSSISVLITQTGLDFVKNLLVTKAISKITPTPISGIDKAVEIPLIGKVHIVLSNITIYRFDVGLSQVIPNAAGVSVAGSDVTCDLNVNWHYAYGSSLFPISVSDTGTASVQVNGLEMGAALGLNVTEGSIKLSTIECNSHIDDISIDLDGGSSWLYQGILDAFKEEIVSTVEKTITKTLKTEISKLGSILQSLPKQIPVDDVASLNVTLVNNPFLSDTSLGFEINGLFIENKPGTHSYRNSLQPPVHCSDPSKMIGIALDEAVFKSAFSLYYNAMFMHWTVDKLPEQSLLNTAGWRFIIPQLYKKYPNDDMSLNLSLSDPPVVQISQQKIDATIYADFIIDVLEGVDTVPVACISLIISSSGSVQITGNNITAHLKMDDLSMSLKWSKIGTLHMFLIQPVVWTMIETVFVPYVNARIGLGFPLPLINGFMLRNAEIITSDSRITVCGDVTYEESFGGTQIYDS | 488 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00220 | 488 | Gene3D | - | 30 | 463 | - | - | |
| Dapi23g00220 | 488 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 29 | 241 | IPR017943 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | SMART | bpi2-2 | 274 | 472 | IPR001124 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | Pfam | LBP - BPI - CETP family, N-terminal domain | 37 | 210 | IPR017942 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | Pfam | LBP - BPI - CETP family, C-terminal domain | 259 | 476 | IPR001124 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | PIRSF | Lipid-binding-protein | 6 | 481 | IPR030675 | GO:0005615(InterPro)|GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | SUPERFAMILY | Bactericidal permeability-increasing protein, BPI | 245 | 476 | IPR017943 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | Gene3D | - | 36 | 216 | - | - | |
| Dapi23g00220 | 488 | SMART | bpi1-3 | 33 | 258 | IPR017942 | GO:0008289(InterPro) | |
| Dapi23g00220 | 488 | PANTHER | OS06G0309200 PROTEIN | 10 | 479 | IPR045897 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00220 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251589 | Dapi7g00199 | Dapi23g00220 | |
| 386982 | Dapi23g00220 | Dapi7g00199 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:4731818 | Dapi24g00932 | Dapi-Chr24:19194769 | wgd | |
| Dapi | Dapi-Chr23:4731818 | Dapi7g00199 | Dapi-Chr7:4179929 | wgd | |
| Dapi | Dapi-Chr23:4731818 | Dapi8g01105 | Dapi-Chr8:23653563 | wgd |