Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dapi23g00238	ATGGATTTCTCGGAGTCTACGAAAGTCGTATACGATAGGGTCCAAAAGATAGAACCCGAAAACGTGTCCAAGATTATCGGGTACCTTCTTTTACAAGATCATGGCGAACGTGAAATGATAAGATTAGCATTCGGGCCGGATAATTTAATACATGGTTTAATCAATAAAGCCCGAACCCACCTTAACTTAGCTTCAAACGCACCTGGTCAACCGATGTCACCTCCTCGGGTCAACTCTATGCCCGATATCCCAATTGGCCCGATTCACTTCACACCGTTCTCTCCTTCAACCCGTCATTCGCCATTGACGATCCAAGTCCCGACCCATTGTTGTGATCATCATGGTCAACCCGTTGACTTTGTTCCCATGGTTTACCCGGCTTCTTATCCTGAAGATTACCACCTTCACAACCACCTCCGTTTAATGTCGTTAGAAGATCAAATGGAGCCCGTTAACAGCCCGGATTTGGGTCCTCGGGCCAGTAGGAGGTCACCGAGTTTACCTGAGTTTCCTTTTAAAGTTTGTCATTATTTCATCAAAGGGTTTTGTAGACATGGAAACAACTGTAGGTATTTGCATCCTACTCCTGAAAGCTTTTCACATATCTTCAGCCCGAAATTGTGTGAGGACGATAACATCTTTTCGCCCATGTCTCTCGAGAAACTAGAGATGGAACTCACTGAGTTACTGAAATCAAGAAGAGGGTTTCCTGTTTCCATAGCTTCTTTACCAATGATTTATTATGAAAAATTCGGTAAAACGCTTCAAGCCGAAGGCTATTTGACCGAAAGTCAGAGACACGGGAAAGCCGGTTATAGCTTGACCAAACTTCTCGCTCGCCTTAAAAGCATTTGTCTCATTGACAGGCCACATGGGCAACACGCGGTCGTGTTGACTGATGACATGGCAAAATGCATGGATCATATTGGAGATAGAAACGAGCATGGTGGAATTGTCGCGGGTTCTCGACAGATATATTTGACTTTTCCAGCTGAAAGTACCTTTTCTGAGCTTGATGTTTACAATTATTTCAACAAATTCGGGCCAGTTCGTGACGTGAGAATTCCATGTCAGCAAAAGAGAATGTTTGGATTTGTGACTTTTGTGTTTGCAGATACAGTTAGGCATATTTTAAACAAGGGGAATCCTCATTTTGTTAGCGGTGCACGCGTTTTGGTCAAACCGTACCGTGAAAAATGCAAGCTTGATGATAGGAAACATGGCTACTCATATCAGCATCCTATGTACCACGGTTCTCACTGTCTTGATACCGAACTCGGGCTGCAGTCAAGCAATGCTCATGCACAACAAATGGACTTCCATTCAACCGAGCGTTTTAACTATTTTCTTGACGTTTTAAACAATGCTACCGCCAGTGAACACAGGATTAGTCAGATTAATACCGAATACAATGAGCAAGAAAGTAGCCAGGGACTGAATCTTCCGGACAGCCCGTTTGCGTCAGGATTAGGGGGTGAAATATCAACAGTTATATAG	1497	43.69	MDFSESTKVVYDRVQKIEPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHGLINKARTHLNLASNAPGQPMSPPRVNSMPDIPIGPIHFTPFSPSTRHSPLTIQVPTHCCDHHGQPVDFVPMVYPASYPEDYHLHNHLRLMSLEDQMEPVNSPDLGPRASRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLHPTPESFSHIFSPKLCEDDNIFSPMSLEKLEMELTELLKSRRGFPVSIASLPMIYYEKFGKTLQAEGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLTDDMAKCMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKLDDRKHGYSYQHPMYHGSHCLDTELGLQSSNAHAQQMDFHSTERFNYFLDVLNNATASEHRISQINTEYNEQESSQGLNLPDSPFASGLGGEISTVI	498

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dapi23g00238	498	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	330	401	-	-
	Dapi23g00238	498	CDD	RRM-AtC3H46-like	325	394	IPR034365	-
	Dapi23g00238	498	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	427	-	-
	Dapi23g00238	498	Pfam	RNA recognition motif	336	382	IPR000504	GO:0003723(InterPro)
	Dapi23g00238	498	SMART	c3hfinal6	171	195	IPR000571	GO:0046872(InterPro)
	Dapi23g00238	498	ProSiteProfiles	Zinc finger C3H1-type profile.	169	196	IPR000571	GO:0046872(InterPro)
	Dapi23g00238	498	SMART	rrm1-1	324	394	IPR000504	GO:0003723(InterPro)
	Dapi23g00238	498	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	323	398	IPR000504	GO:0003723(InterPro)
	Dapi23g00238	498	SUPERFAMILY	RNA-binding domain, RBD	335	413	IPR035979	GO:0003676(InterPro)
	Dapi23g00238	498	ProSiteProfiles	OST-type HTH domain profile.	218	301	IPR025605	-
	Dapi23g00238	498	Gene3D	-	170	232	-	-
	Dapi23g00238	498	Gene3D	-	329	401	IPR012677	-
	Dapi23g00238	498	SUPERFAMILY	CCCH zinc finger	172	194	IPR036855	GO:0046872(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dapi23g00238	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	251599	Dapi7g00219	Dapi23g00238
	256726	Dapi23g00238	Dapi16g01921
	381663	Dapi16g01921	Dapi23g00238
	386992	Dapi23g00238	Dapi7g00219

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Dapi	Dapi-Chr23:5016381	Dapi24g01070	Dapi-Chr24:23837253	dispersed
	Dapi	Dapi-Chr16:72325967	Dapi23g00238	Dapi-Chr23:5016381	wgd
	Dapi	Dapi-Chr23:5016381	Dapi32g02173	Dapi-Chr32:83180539	wgd
	Dapi	Dapi-Chr23:5016381	Dapi7g00219	Dapi-Chr7:4480583	wgd