AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00255 | ATGTCAGTTTCCGGCCACGTCAACTACAATCTCCACTACCGATCGACGAAAGATGACGCCTGGTACAACTGCGCCGTCCTTCTAGAACACGGAAATCGCCTCCGCGTCAAGTTTAAAGGCCACGAGCAGACCGATAATGATGAGGTATTCTCCGTCTCCGATTTCTCCACGAACGATGAAATTGAAGCGTTCCGTCGGAGATTCCGTCCGGAATCTGAATCGGTTGGAGATAATGAGTGCGCTAGAGTTGCTGAAGGTGTTATGATCTGTGCTACTGCTGCGGATTCACGCGATAAACAACCGCGATACTTTGACGCCATTGTTGATGCTGTGTGTAACAAAGAACACACGCCCGAGAAGTGTTTATGCACTTATTTTCTATTTTGGCAGCATGGTCCAGAAGAGGGCAATACAACAGAAGCAAATCTTGATGATATATACCTCATTAAGCCTGGTTCTGTTGATCCTGCAGTGGTCAACTTTACAAAGCTTGTGAAAGATAAAGTCAAAGGGGCCTCTTTTGAATTTACTTTGATCCCCAAGAATCCATGTTTGTTCAAAGGAACAGGCTCAAATGAAACTATCACAAAATCACAGGCAAGTTTTTCAGTTAATGTCATTTTGTGTTGCGGCAGGGACTTGGGAGGGGAGAAAGAAACCAACAATCATCATTATCTTATATTGGAAAACTTAGAGAAAGATTTATGTCCATTGTTAATGATGGATTTCATACGTGAACGGACTTTAATAACAGCAGAAACGTACATTTTTCCAAATTTGTTATCAGAAGTAACGTATGCAAGGGGAGCAATCTTGGTGGATAACAAAACAAATCTGAAGAAGATATACGAATATATAACTAATCCAAATCACCTTATCGTATCTTCTTCCGGAAGGCCATGGGTAATAGCTGAAGATAAGCTTAGAACTGGAAAATTCAACACAAACCTGCACAGCTTCCGGCCTAAGCCTAAGAATTACAATACAAAGAACGATTTGATGGTTGTGCGGCTAGGAACAGAAGAATACACAAAAGCTAAACAACTAAAAGATTTGTATTTGGGCTTTCGCAATCATCTTAATGGACTTGTGCAGAGGTTAGCTATGGAGGAGAAGAAGAACCAGTGCCTATTAAGTGCAAACTAG | 1146 | 41.54 | MSVSGHVNYNLHYRSTKDDAWYNCAVLLEHGNRLRVKFKGHEQTDNDEVFSVSDFSTNDEIEAFRRRFRPESESVGDNECARVAEGVMICATAADSRDKQPRYFDAIVDAVCNKEHTPEKCLCTYFLFWQHGPEEGNTTEANLDDIYLIKPGSVDPAVVNFTKLVKDKVKGASFEFTLIPKNPCLFKGTGSNETITKSQASFSVNVILCCGRDLGGEKETNNHHYLILENLEKDLCPLLMMDFIRERTLITAETYIFPNLLSEVTYARGAILVDNKTNLKKIYEYITNPNHLIVSSSGRPWVIAEDKLRTGKFNTNLHSFRPKPKNYNTKNDLMVVRLGTEEYTKAKQLKDLYLGFRNHLNGLVQRLAMEEKKNQCLLSAN | 381 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00255 | 381 | PANTHER | SAWADEE PROTEIN | 6 | 373 | - | - | |
| Dapi23g00255 | 381 | Gene3D | - | 75 | 144 | - | - | |
| Dapi23g00255 | 381 | Pfam | SAWADEE domain | 9 | 146 | IPR032001 | GO:0003682(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00255 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251611 | Dapi7g00235 | Dapi23g00255 | |
| 256722 | Dapi23g00255 | Dapi16g01895 | |
| 381654 | Dapi16g01895 | Dapi23g00255 | |
| 387004 | Dapi23g00255 | Dapi7g00235 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:5269160 | Dapi32g02143 | Dapi-Chr32:81535251 | dispersed | |
| Dapi | Dapi-Chr16:71525135 | Dapi23g00255 | Dapi-Chr23:5269160 | wgd | |
| Dapi | Dapi-Chr23:5269160 | Dapi32g02139 | Dapi-Chr32:81421934 | wgd | |
| Dapi | Dapi-Chr23:5269160 | Dapi7g00235 | Dapi-Chr7:4713368 | wgd |