AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00266 ATGCATAAAACGGCGCAAGCGTGGTTCACCGGAGGTCCGAGCCAGAAGAACAGCGATCTCAATAATCAGTCTCCTTCTCTTCTTGCTGATTGGAACGCTTACGCCGCATCTTCACAATCTAATCAAGATCTGGATTCGTCTGGTCTCGGTTTCGATCTCGAAGCCGCAGTTCGATCGGCTAACGATAAGGTTTCCGGCACTTTTAACGTAGTTTCAAAGGGAGTGAGGGACATACCTGGAAGCTTGCAATCTGCAACAAGTAATGTCCCAACTGGAAAATCTCTTATGACATTTGGAATGCTTCTTGCTGTTGGGGTGTTCCTTGTGTTCATTGCTGTCACTGTGTTTCTACCAGTCATGGTGATTGTGCCTCAGAAGTTTGCTATATGTTTCACCATTGGTTGCGCCCTCATAATTGCTTCATTTTTTGCTCTCAAAGGATATAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTCCCTATTACATTGGGCTTTATTGGCAGCATGGTGGGCACCATTTATGTTTCAATGGTGCTTCACAGTTATGTTCTTTCTGTATTCTTTTCTGTGTTACAGGTCATCTCATTGTCATACTATGCAATTTCCTACTTTCCTGGAGGATCGGCTGGCGTGAAATTCTTCACCTCTGCCATTACTTCTTCAATTCTGAGATGCTTTGGGAGGTGA 693 44.01 MHKTAQAWFTGGPSQKNSDLNNQSPSLLADWNAYAASSQSNQDLDSSGLGFDLEAAVRSANDKVSGTFNVVSKGVRDIPGSLQSATSNVPTGKSLMTFGMLLAVGVFLVFIAVTVFLPVMVIVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYVLSVFFSVLQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00266 230 PANTHER UNCHARACTERIZED 1 221 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Dapi23g00266 230 MobiDBLite consensus disorder prediction 8 22 - -
Dapi23g00266 230 Pfam Got1-Sft2-like family 95 207 IPR007305 GO:0016192(InterPro)
Dapi23g00266 230 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00266 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251620 Dapi7g00246 Dapi23g00266
387013 Dapi23g00266 Dapi7g00246
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:5381862 Dapi2g00381 Dapi-Chr2:7004445 dispersed
Dapi Dapi-Chr23:5381862 Dapi7g00246 Dapi-Chr7:4861652 wgd