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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00281 ATGGCCAAGCAAATGATTGTTGTGAAGATTGGCGTCAACAACGAAAAGAAAAGCCGTAAGGCTATGAAGATCGCTGTTAGTGTCACCGGTGTGGAATCGGTAGCTTTCGTTGGTTCAAATAAAGATCAGATAGCGTTGACAGGTGAAGGAATCGACTCAATCGAATTGGCAACTTTGCTAAGGAAAAGTGTAGGTTACACGGAGCTGGTGAGTGTTGGTTCGGTGGAGGAGAAGAAACCTGCCGCTCCCGCTAGTGCTGCAGCCACTACCGATGGTGGTGCCACCGGTTTATGCTCACCATTATAA 306 47.71 MAKQMIVVKIGVNNEKKSRKAMKIAVSVTGVESVAFVGSNKDQIALTGEGIDSIELATLLRKSVGYTELVSVGSVEEKKPAAPASAAATTDGGATGLCSPL 101
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00281 101 Gene3D - 1 78 - -
Dapi23g00281 101 MobiDBLite consensus disorder prediction 79 101 - -
Dapi23g00281 101 PANTHER OS04G0464100 PROTEIN 4 82 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00281 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251622 Dapi7g00258 Dapi23g00281
256719 Dapi23g00281 Dapi16g01887
381646 Dapi16g01886 Dapi23g00281
381647 Dapi16g01887 Dapi23g00281
387015 Dapi23g00281 Dapi7g00258
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:5749430 Dapi7g00256 Dapi-Chr7:5128173 dispersed
Dapi Dapi-Chr23:5726605 Dapi23g00281 Dapi-Chr23:5749430 tandem
Dapi Dapi-Chr23:5749430 Dapi23g00282 Dapi-Chr23:5801949 tandem