AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00297 | ATGCTTCGAGCTTTAAAGAAGACGTCTTTCAATGGCGTCGGCCGGCGATGGATAACCAACACCGTTATGAGTTTCGGAGACGGCAGCCATGGTGCTCTTGGCTTACCTACCTCCGTCATCGGAATCGGTTCCGACACATACGAACCAACTCCAATCTCAACCCTACCTCCCGACGTCTCCGCCGTCGCCGCCGGTCACTACCACTCCCTCGCCGTTACTTCTGACGTTGGCCACCTCTGGTCATGGGGCCGCAATGTGGAATATCAGCTTGGCCGTGCAATTGATTCCCCTAGGGAAATATGGGTCAACCCGGGGAGAATAAATGGGTTGAGTGGGGTCCGATCGGCATATGCGTCAGGTGTGGTGTCTGCTGCTGTTAGGGTTGATGGGTCGTTATGGATTTGGGGGAAATCAAAGCGTGGTCAATTAGGGCTTGGAATTGGGATTACAGAGGCTGTTGTTCCTTCTAGGGTTAAAGTTCTTGATAAAGAAGAGATAATTAAGGTCTCATTTGGATGGGGACATGCTCTTGCACTTACCAAAGATGGAAAGTTATTTGGTTGGGGATATTCAGCAGATGGTAGATTAGGGAAAAGAAAAATTATGGGGATTTCACATCTTGATTCAAAGGCTAACTTGTCTTCAAGTTTGAAGCTTGAAGATGCTGAGAAAGTGGTCTTGGAAGCTATGGACAAGGAGAATGATATGCCCATAATCTGGGAACCCTGCTTAATCGATGAGCTAAAAGGTGTTGAAGTTGCTGATGTGTCATGTGGGCTCGATCATACCCTGGTTCTTCTACGTGATGGAACCTTACTCAGTGGTGGAAGCAATGCATATGGTCAACTGGGTAGGTCAACACAAGGTATGGAGTTTCTTCCTGTTGACATAAGCGTCTACCCTGTCTCCGTTGCGTCCGGGCTGGGCCATTCGTTAGCAATATGCAGAATCCCATCCGCAGACGGCGGCGGTGCCATTTCAGGCATCTTTTCATGGGGTTGGGGTCGGGATTCTCAGCTCGGGAGGATGGGTCCCGCCAACATCCCATTGCCTGTGGACGGGCTTTTAGGGGAAAGCCCATTGTCAGTTTCAGGTGGGCGTGTGCATTCCATCGCTGTCATGACGAATGGAGAGGCTTTTACTTGGGGGTGTGGTAGGAACGGAAGGCTCGGGTTGGGTAGCTCTGCAGACGAGCCCGAACCCATGTTGGTTGAGTTTTCAGAAGGTACTAATGTTTTACAAGCAGTTGCAGGGTTTGATCATACTCTAGTCCTAACCAGCAACTAA | 1287 | 49.88 | MLRALKKTSFNGVGRRWITNTVMSFGDGSHGALGLPTSVIGIGSDTYEPTPISTLPPDVSAVAAGHYHSLAVTSDVGHLWSWGRNVEYQLGRAIDSPREIWVNPGRINGLSGVRSAYASGVVSAAVRVDGSLWIWGKSKRGQLGLGIGITEAVVPSRVKVLDKEEIIKVSFGWGHALALTKDGKLFGWGYSADGRLGKRKIMGISHLDSKANLSSSLKLEDAEKVVLEAMDKENDMPIIWEPCLIDELKGVEVADVSCGLDHTLVLLRDGTLLSGGSNAYGQLGRSTQGMEFLPVDISVYPVSVASGLGHSLAICRIPSADGGGAISGIFSWGWGRDSQLGRMGPANIPLPVDGLLGESPLSVSGGRVHSIAVMTNGEAFTWGCGRNGRLGLGSSADEPEPMLVEFSEGTNVLQAVAGFDHTLVLTSN | 428 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00297 | 428 | Gene3D | - | 15 | 227 | IPR009091 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 372 | 393 | IPR000408 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 21 | 37 | IPR000408 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 169 | 185 | IPR000408 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 185 | 199 | IPR000408 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 79 | 95 | IPR000408 | - | |
| Dapi23g00297 | 428 | PRINTS | Chromosome condensation regulator RCC1 signature | 130 | 146 | IPR000408 | - | |
| Dapi23g00297 | 428 | Gene3D | - | 317 | 428 | IPR009091 | - | |
| Dapi23g00297 | 428 | PANTHER | REGULATOR OF CHROMOSOME CONDENSATION | 20 | 427 | IPR051210 | - | |
| Dapi23g00297 | 428 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 253 | 282 | - | - | |
| Dapi23g00297 | 428 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 59 | 89 | - | - | |
| Dapi23g00297 | 428 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 256 | 266 | IPR000408 | - | |
| Dapi23g00297 | 428 | SUPERFAMILY | RCC1-BLIP-II | 20 | 427 | IPR009091 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 20 | 75 | IPR000408 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 183 | 269 | IPR000408 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 130 | 182 | IPR000408 | - | |
| Dapi23g00297 | 428 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 129 | 179 | IPR000408 | - | |
| Dapi23g00297 | 428 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 329 | 373 | IPR000408 | - | |
| Dapi23g00297 | 428 | Pfam | Regulator of chromosome condensation (RCC1) repeat | 376 | 425 | IPR000408 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 327 | 376 | IPR000408 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 377 | 428 | IPR000408 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 270 | 317 | IPR000408 | - | |
| Dapi23g00297 | 428 | Gene3D | - | 228 | 316 | IPR009091 | - | |
| Dapi23g00297 | 428 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 77 | 129 | IPR000408 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00297 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 251629 | Dapi7g00271 | Dapi23g00297 | |
| 387022 | Dapi23g00297 | Dapi7g00271 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:6136500 | Dapi2g01206 | Dapi-Chr2:31786125 | dispersed | |
| Dapi | Dapi-Chr23:6136500 | Dapi7g00271 | Dapi-Chr7:5523574 | wgd |