Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dapi23g00321 | ATGTCTTATTCACTACTTATCTCCACCTTCACTGCCTTTCCTAAAACAAACACCCAATCCATCTCCCAACGACCCATCAACACTCGAACCAACCAAACCCAAGGGTTCAGGGTCTCATGCAACGGCGCACCAGATAATATTAATCACCATGACAACCAACTCATACTCCCCCAACCCCAAAAGCTTATACTACCCAACGTAGACCGGAGGAACCTCCTCGTGGGGCTCGGCGGCCTCTACACGACCGCGAACCTCGCTTCCTTACCCGCAGCATTAGCTGCTCCCATAACCACTCCTGATATCACAACCATATGCCAGGAAGCAGATTCCGGGAACATTGAAGACGCGGTTAGGACACAAAATTGTTGTCCGCCTAACCTCGGAAAGACGATTAAAGATTTCAAGTTTCCAACCGAAAAAACGGTGAGGATGAGATGGCCGGCACATAATGGGACCAAAGAGCAGGTGGATAAATATAGAAGAGCCATCCAAGCCATGAGAGCTCTCCAGGACGATCAACCGCACAGCTTCAACAACCAAGCTAAAATCCATTGTGCATACTGCAACGGAGGATACACTCAATTCGATAACGGTTTCCCCAATATCGATATTCAGATCCACAACTCATGGCTCTTCTTTCCTTTCCATCGCTGGTACCTTTACTTCTACGAGAGAATACTCGGAAAGTTGATTAACGATCCCACTTTCGCCTTACCTTTCTGGAAATGGGACGAACCAGCCGGAATGGCCATTCCAGAAATCTTTGCACCGAAAGATATTAATGGAAAACCAAACTCCCTGTATGATGTTTACCGGCAAGCCCGTCATCTCCCGCCAACATTAATCGATCTGGACTTCGATGGCAATGAAAACGGGGTTCCGGATCAGACACAGATAGCTTGCAATCTTCGTACAGTGTACCGAGATTTGGTTAGAAACGGAGTGGATACACTAAGCTTCTTTGGGGGCGAATACGTAGCTGGCACCAATGGTGCGAAGTCAGTCGGATCGGTTGAAGCGGGAAGTCATACGGCCGTGCACAGATGGGTAGGCGACTCAAACCAACCTAATAATGAGGACATGGGTAACTTCTACTCCACTGGGTATGACCCTGTGTTCTACATCCATCATTCAAATATAGACCGTATGTGGAAGCTATGGAAGGAGTTGGGCCTTCCGGGACACGTAGAACCGACGGGTCCAGACTGGTTAAACGCGTCATATGTGTTCTATGACGAGAATCAGGACCTTGTACGTGTTTATAATAAAGACTCCGTCAATATAGACAAGTTCAAGTACAATTACATTGAAAACTCCAAGGAAGTGTTCCCATGGCGCAGGAGTCGGCCCGCCAAACGTGACGCAAGCTAG | 1371 | 47.92 | MSYSLLISTFTAFPKTNTQSISQRPINTRTNQTQGFRVSCNGAPDNINHHDNQLILPQPQKLILPNVDRRNLLVGLGGLYTTANLASLPAALAAPITTPDITTICQEADSGNIEDAVRTQNCCPPNLGKTIKDFKFPTEKTVRMRWPAHNGTKEQVDKYRRAIQAMRALQDDQPHSFNNQAKIHCAYCNGGYTQFDNGFPNIDIQIHNSWLFFPFHRWYLYFYERILGKLINDPTFALPFWKWDEPAGMAIPEIFAPKDINGKPNSLYDVYRQARHLPPTLIDLDFDGNENGVPDQTQIACNLRTVYRDLVRNGVDTLSFFGGEYVAGTNGAKSVGSVEAGSHTAVHRWVGDSNQPNNEDMGNFYSTGYDPVFYIHHSNIDRMWKLWKELGLPGHVEPTGPDWLNASYVFYDENQDLVRVYNKDSVNIDKFKYNYIENSKEVFPWRRSRPAKRDAS | 456 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dapi23g00321 | 456 | Pfam | Common central domain of tyrosinase | 175 | 389 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 207 | 224 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | PANTHER | TYROSINASE FAMILY MEMBER | 67 | 438 | IPR050316 | - | |
| Dapi23g00321 | 456 | Gene3D | - | 94 | 441 | IPR008922 | - | |
| Dapi23g00321 | 456 | SUPERFAMILY | Di-copper centre-containing domain | 115 | 435 | IPR008922 | - | |
| Dapi23g00321 | 456 | PRINTS | Tyrosinase copper-binding domain signature | 207 | 224 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | PRINTS | Tyrosinase copper-binding domain signature | 238 | 243 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | PRINTS | Tyrosinase copper-binding domain signature | 369 | 387 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | PRINTS | Tyrosinase copper-binding domain signature | 342 | 353 | IPR002227 | GO:0016491(InterPro) | |
| Dapi23g00321 | 456 | Pfam | Polyphenol oxidase middle domain | 399 | 450 | IPR022739 | GO:0004097(InterPro) | |
| Dapi23g00321 | 456 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 370 | 381 | IPR002227 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dapi23g00321 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Dapi | Dapi-Chr23:6730337 | Dapi7g00294 | Dapi-Chr7:6023311 | dispersed | |
| Dapi | Dapi-Chr23:6724324 | Dapi23g00321 | Dapi-Chr23:6730337 | tandem | |
| Dapi | Dapi-Chr23:6730337 | Dapi23g00322 | Dapi-Chr23:6745035 | tandem |