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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00394 ATGGGCGCTTGCGGGTGGGTTAAGAGGCTATTCGGCGTTAATCGAAAGAATGAAAACAGAGCCAAAACAGGGGAGATACAGCAGGATTCCAAGGTTTCAAACGGGTCAAGAGGCCGAGATTCTTCGTTGCGAGAATCAAGTTTTCGTGTCGGTAGTACAAAAGTTATTGGTCGAAGTACAGGAACGAGAGAATTTGCTGCTACTCGCATCCAAAATGCATATCGTTCTTATCGGGCGAGAAAAGCGTTACATTGCTTGAAAGGCACAACAAGATTTCAGCAGCTAATCGAGGCTGACTCACTTACAAAACAAGCTTCTTCTGCTCTTAACAAAATACATTTTTGGAGCAAAATACAAATGGAAATCCAAAACCGCCGCCATTGGATGGTAGCAGAAGGGCGGATGAAGCAAAAGAAGTTTGAGAATCAAGTCAAATTTGAGTCTAAGCTTCATGAACTTGAGGTCGAATGGTGCGGTGGGCCGGAGACAATGGAAGAGATCGTGTCCCGGATGCAACAACGCGAGGAAGCCACAAATAAGCGTGAGCGAGCAATGGCATACGCCTTCTACCACCAATGGAGGGCGAACTCAAATCGATATTTTGGACAAGCGTATTATGATCTAAGCAAAGAGAGTTGGGGGTGGAGTTGGAAGGAGCGGTGGATTGCAGTTTGCCCGTGGGAGGCTCGGGTGGTTGTTCGGGCCAAACCGGGCAAAAAAACAAAGCATGGTGGTGGGGGTGCACCAAAGATAGTGGTTGCAGTGAAACCTCATGTGAGTAATGGAAAGGGTACAATTAAAGGTATTTCCTAA 813 46.62 MGACGWVKRLFGVNRKNENRAKTGEIQQDSKVSNGSRGRDSSLRESSFRVGSTKVIGRSTGTREFAATRIQNAYRSYRARKALHCLKGTTRFQQLIEADSLTKQASSALNKIHFWSKIQMEIQNRRHWMVAEGRMKQKKFENQVKFESKLHELEVEWCGGPETMEEIVSRMQQREEATNKRERAMAYAFYHQWRANSNRYFGQAYYDLSKESWGWSWKERWIAVCPWEARVVVRAKPGKKTKHGGGGAPKIVVAVKPHVSNGKGTIKGIS 270
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00394 270 PANTHER IQ-DOMAIN 5-RELATED 45 236 - -
Dapi23g00394 270 MobiDBLite consensus disorder prediction 19 46 - -
Dapi23g00394 270 ProSiteProfiles IQ motif profile. 63 91 - -
Dapi23g00394 270 MobiDBLite consensus disorder prediction 26 46 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00394 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
74097 Dapi12g01379 Dapi23g00394
76550 Dapi18g00877 Dapi23g00394
79353 Dapi23g00394 Dapi2g00638
251681 Dapi7g00371 Dapi23g00394
387074 Dapi23g00394 Dapi7g00371
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:8786362 Dapi5g01692 Dapi-Chr5:109165085 dispersed
Dapi Dapi-Chr12:96991164 Dapi23g00394 Dapi-Chr23:8786362 wgd
Dapi Dapi-Chr18:22079711 Dapi23g00394 Dapi-Chr23:8786362 wgd
Dapi Dapi-Chr2:12374253 Dapi23g00394 Dapi-Chr23:8786362 wgd
Dapi Dapi-Chr23:8786362 Dapi7g00371 Dapi-Chr7:8133179 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Dapi31g00813 ACH,DST,WGDA 1 551 IQD Protein family AT1G74690 39.261 1.13e-75 248.0
Dapi26g00928 DST 11 534 IQD Protein family AT4G00820 42.182 1.68e-109 334.0
Dapi19g02456 DST 140 794 IQD Protein family AT1G19870 34.532 1.28e-81 272.0
Dapi14g01421 DST 1 289 IQD Protein family AT4G14750 33.226 3.40e-35 129.0
Dapi14g01286 DST 35 100 IQD Protein family AT3G51380 75.758 3.94e-27 95.9
Dapi14g01026 ACH,DST 128 575 IQD Protein family AT1G74690 34.483 2.12e-48 175.0
Dapi18g00877 ACH,DST 61 246 IQD Protein family AT3G15050 48.925 5.83e-63 196.0
Dapi18g01006 ACH,DST 1 353 IQD Protein family AT3G16490 50.37 1.08e-87 269.0
Dapi25g01504 . 1 404 IQD Protein family AT2G26180 57.471 1.09e-138 402.0
Dapi19g00952 ACH,DST,WGDA 1 575 IQD Protein family AT1G74690 37.182 5.18e-81 263.0
Dapi5g00388 DST,WGDA 1 443 IQD Protein family AT5G13460 45.011 2.32e-95 291.0
Dapi2g00638 ACH,DST 63 246 IQD Protein family AT3G15050 49.457 5.03e-62 192.0
Dapi2g00498 ACH,DST 45 353 IQD Protein family AT3G16490 45.588 1.64e-53 177.0
Dapi18g01868 ACH,DST,WGDA 48 333 IQD Protein family AT5G07240 44.308 1.81e-37 137.0
Dapi18g02237 DST,WGDA 189 460 IQD Protein family AT5G03040 34.507 6.95e-27 109.0
Dapi18g02563 DST,WGDA 215 346 IQD Protein family AT1G19870 64.662 1.59e-47 179.0
Dapi10g00936 DST 11 534 IQD Protein family AT4G00820 42.364 5.97e-111 338.0
Dapi3g02348 DST 195 794 IQD Protein family AT1G19870 36.063 7.25e-83 276.0
Dapi12g01379 ACH 36 225 IQD Protein family AT3G15050 43.284 4.41e-46 152.0
Dapi31g00530 ACH 1 448 IQD Protein family AT5G03040 54.604 1.66e-146 424.0
Dapi20g00655 . 8 517 IQD Protein family AT3G59690 49.554 2.23e-146 429.0
Dapi20g01104 . 1 396 IQD Protein family AT3G49260 52.618 4.20e-100 305.0
Dapi29g00069 ACH,DST,WGDA 1 353 IQD Protein family AT3G16490 50.392 2.47e-87 267.0
Dapi31g02254 ACH 197 788 IQD Protein family AT1G19870 36.758 7.86e-90 296.0
Dapi5g02412 DST,WGDA 1 438 IQD Protein family AT5G13460 44.643 1.53e-99 301.0
Dapi32g00848 DST 1 353 IQD Protein family AT3G16490 45.293 4.23e-62 202.0
Dapi7g02920 DST,WGDA 11 534 IQD Protein family AT4G00820 44.465 9.20e-111 335.0
Dapi3g00730 ACH,DST,WGDA 1 575 IQD Protein family AT1G74690 37.521 1.65e-83 269.0
Dapi21g01202 . 202 246 IQD Protein family AT3G22190 66.667 1.67e-16 72.8
Dapi15g02282 ACH 197 788 IQD Protein family AT1G19870 36.758 7.86e-90 296.0
Dapi15g02033 . 1 448 IQD Protein family AT5G03040 52.967 7.29e-134 391.0
Dapi15g01726 . 1 517 IQD Protein family AT3G59690 47.359 1.25e-138 408.0
Dapi15g01655 . 1 240 IQD Protein family AT3G15050 47.325 1.43e-67 208.0
Dapi8g02474 ACH,DST,WGDA 1 449 IQD Protein family AT5G03040 42.796 1.91e-100 305.0
Dapi21g02304 DST,WGDA 1 438 IQD Protein family AT5G13460 44.966 2.93e-99 301.0
Dapi25g01772 ACH,DST 382 481 IQD Protein family AT4G23060 53.398 7.93e-23 89.7
Dapi25g01773 ACH,DST 165 481 IQD Protein family AT4G23060 41.056 3.05e-58 196.0
Dapi25g02213 ACH,DST,WGDA 1 458 IQD Protein family AT5G03040 44.748 1.45e-102 310.0
Dapi5g01692 DST 1 216 IQD Protein family AT3G15050 47.186 5.46e-61 194.0
Dapi32g00199 DST 52 364 IQD Protein family AT1G01110 39.752 2.91e-53 178.0
Dapi6g00537 DST 1 414 IQD Protein family AT1G72670 41.758 2.07e-85 265.0
Dapi6g00477 DST 1 353 IQD Protein family AT3G16490 50.864 1.22e-93 285.0
Dapi24g02603 ACH,DST,WGDA 1 449 IQD Protein family AT5G03040 44.276 1.88e-99 304.0
Dapi23g00394 ACH,DST,WGDA 1 254 IQD Protein family AT3G15050 48.327 4.72e-76 230.0
Dapi8g00512 WGDA 174 794 IQD Protein family AT1G19870 32.778 1.12e-73 253.0
Dapi7g00371 ACH,DST,WGDA 1 254 IQD Protein family AT3G15050 48.897 2.35e-77 233.0
Dapi7g01798 ACH,DST 1 374 IQD Protein family AT4G14750 48.649 3.55e-93 283.0
Dapi23g00221 DST,WGDA 1 396 IQD Protein family AT5G35670 38.084 1.62e-62 206.0
Dapi12g02061 ACH,DST,WGDA 1 480 IQD Protein family AT4G23060 39.634 1.37e-59 200.0
Dapi12g02258 DST,WGDA 1 386 IQD Protein family AT3G22190 43.766 2.29e-89 273.0
Dapi12g02265 DST,WGDA 34 312 IQD Protein family AT3G22190 59.155 1.10e-83 273.0
Dapi3g00078 . 82 331 IQD Protein family AT5G07240 44.361 7.60e-46 158.0
Dapi4g01198 . 1 396 IQD Protein family AT3G49260 52.618 4.83e-100 305.0
Dapi1g00284 WGDA 1 392 IQD Protein family AT3G22190 55.802 7.77e-122 358.0
Dapi1g00463 ACH,WGDA 1 480 IQD Protein family AT4G23060 36.253 1.01e-47 167.0
Dapi9g02064 ACH,DST 1 481 IQD Protein family AT4G23060 37.992 1.02e-56 192.0
Dapi4g00649 . 1 517 IQD Protein family AT3G59690 50.266 2.57e-154 449.0
Dapi24g00696 ACH,DST,WGDA 108 342 IQD Protein family AT5G07240 37.413 4.21e-37 136.0
Dapi24g00545 ACH,DST,WGDA 98 379 IQD Protein family AT5G03040 48.432 2.00e-77 248.0
Dapi24g00381 ACH,WGDA 1 476 IQD Protein family AT1G19870 32.665 8.05e-53 195.0
Dapi6g00076 . 1 332 IQD Protein family AT3G16490 42.651 6.90e-43 151.0
Dapi21g01846 DST 1 233 IQD Protein family AT3G15050 45.161 1.66e-62 196.0
Dapi9g01751 . 1 404 IQD Protein family AT2G26180 58.161 6.25e-138 400.0
Dapi22g00071 . 1 332 IQD Protein family AT3G16490 42.363 1.32e-42 150.0
Dapi16g00877 DST 1 353 IQD Protein family AT3G16490 45.22 1.65e-61 201.0
Dapi16g00194 DST 40 364 IQD Protein family AT1G01110 39.82 1.91e-54 181.0
Dapi8g00879 DST,WGDA 235 352 IQD Protein family AT5G62070 37.931 2.41e-13 64.7
Dapi8g00720 ACH,DST,WGDA 98 379 IQD Protein family AT5G03040 48.084 2.39e-76 246.0
Dapi7g00200 DST,WGDA 1 396 IQD Protein family AT5G35670 40.587 5.67e-68 219.0
Dapi9g02504 ACH,DST,WGDA 1 458 IQD Protein family AT5G03040 44.235 4.16e-103 311.0
Dapi21g00440 DST,WGDA 1 443 IQD Protein family AT5G13460 44.396 6.57e-94 287.0
Dapi30g00283 DST,WGDA 11 534 IQD Protein family AT4G00820 52.269 1.32e-151 442.0
Dapi30g01066 ACH,DST 6 575 IQD Protein family AT1G74690 34.694 1.49e-67 226.0
Dapi28g01995 DST,WGDA 36 377 IQD Protein family AT3G22190 44.22 3.25e-84 258.0
Dapi28g02004 . 1 379 IQD Protein family AT3G22190 49.742 8.88e-91 278.0
Dapi3g00176 ACH,DST,WGDA 1 243 IQD Protein family AT5G03040 45.749 1.15e-56 184.0
Dapi28g01772 ACH,DST,WGDA 1 480 IQD Protein family AT4G23060 39.634 1.37e-59 200.0
Dapi6g01316 DST 1 572 IQD Protein family AT1G18840 32.872 3.27e-66 222.0
Dapi13g01649 . 209 315 IQD Protein family AT2G26410 46.729 1.22e-20 86.7
Dapi28g00151 ACH 1 378 IQD Protein family AT4G14750 43.609 6.35e-72 226.0
Dapi23g02497 DST,WGDA 129 533 IQD Protein family AT4G00820 49.4 1.91e-104 317.0
Dapi32g00959 . 1 364 IQD Protein family AT5G03960 30.541 5.98e-18 82.0
Dapi30g01467 DST 1 289 IQD Protein family AT4G14750 32.903 5.31e-35 130.0
Dapi30g01349 DST 35 100 IQD Protein family AT3G51380 75.758 2.91e-26 93.6
Dapi2g02623 . 55 138 IQD Protein family AT3G52290 52.381 5.44e-10 54.3
Dapi2g02794 ACH,DST,WGDA 53 352 IQD Protein family AT5G62070 44.262 4.03e-31 117.0
Dapi2g03138 ACH,DST,WGDA 1 460 IQD Protein family AT5G03040 39.173 7.39e-84 265.0
Dapi2g03424 DST,WGDA 215 346 IQD Protein family AT1G19870 63.91 4.94e-47 178.0
Dapi22g01338 DST 1 563 IQD Protein family AT1G18840 32.865 5.24e-66 219.0
Dapi22g00935 ACH,DST,WGDA 1 353 IQD Protein family AT3G16490 50.868 2.78e-93 283.0
Dapi22g00877 DST 1 414 IQD Protein family AT1G72670 41.538 7.10e-84 261.0
Dapi23g01744 ACH,DST 1 374 IQD Protein family AT4G14750 47.7 2.95e-92 280.0
Dapi14g00265 DST,WGDA 11 534 IQD Protein family AT4G00820 52.269 1.32e-151 442.0
Dapi19g00432 ACH,DST,WGDA 1 445 IQD Protein family AT5G03040 45.397 6.80e-102 310.0
Dapi19g00078 ACH 82 331 IQD Protein family AT5G07240 43.396 5.69e-45 156.0
Dapi17g00416 WGDA 1 229 IQD Protein family AT4G23060 43.043 5.24e-25 99.8
Dapi29g02268 . 1 281 IQD Protein family AT5G03040 36.491 1.40e-48 167.0
Dapi15g00238 DST 1 551 IQD Protein family AT1G74690 38.489 4.91e-75 246.0
Dapi13g00061 ACH,DST,WGDA 1 353 IQD Protein family AT3G16490 50.909 2.79e-88 270.0