AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dapi23g00441 ATGACGGCAATCTTATCCTTCATTACAACATCCCCAATTCACTCCAGACTCATTAAGAATTCAACAACCACCTCCGCATTTCCATTAAACTCAACCTCTCGACTCGCCATACCTAATAATCATCAACATCCTGCTCCCTTGTTCCTTCCAGAGGTTGAAAGTGCTGTTGATGCCTTATATCCCGAATTCCGGGCCATTGATAATCTTGTGGCATGCAATACATCTAGAGTTCTCAAAGCTTTTCAGAATGCTAGAGTTGGATCTCATCATTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGGGGCCGAGAAGCCCTTGATCAAGCTTTTGCAGAAATTTTTGGTGCCGAATCTGCAATTGTCCGGTCACAGTTTTTCTCAGGAACTCATGCTATTACCTGTGCTCTTTTTGCTTTCTTGAGGCCAGGTGATGAGCTTTTGGCGGTTGCGGGTGCTCCTTATGATACACTTGAGGAAGTGATAGGAATTAGGGATGGCAATGGATTAGGTTCCTTAAAAGATTTTGGAATTAGTTATCGAGAAGTTGATCTTGCCGATGATGGAGGGCTTGATTGGGATGCTCTTGAGGTTGCGTTAAAACCTCAAACAAAATGTGCTCTTATTCAAAGGTCATGCGGGTATTCTTGGCGTAGAAGTTTAAGCGTGAATGAAATTTCTAGAGCAATACACATCATCAAGTCACAAAATCCAAATTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTATTGCAGGGAGTTTAATTAAAAACCCGGGTGGAACAATCGCACCATGTGGCGGATACGTTGCAGGGAAAGAAGAATGGGTAAAAGCAGCAGCAGCCCGTCTCTCTGCACCAGGTCTTGGGGTTGACTGCGGGTCAACTCCTGGTGATATTATGAGAACATTCTTTCAAGGATTATATCTCTCGCCTCAAATGGTTGGGGAAGCAATTAAGGGCGGTTTACTTATCGCGGAAGTTATGTCCATTAAAGGTTACAAAGTCCAGCCGCTTCCTCGAGTCCCTCGTCACGATATAGTACAGGCGGTACAACTTGGAAGCCGAGAGAAGCTTCTTGCTTTCTGTGAGGCTGTACAAAGAAGCTCGCCTGTAAGCTCTTATGCAAAGCCGATTGCAGGCTTGACAGCTGGCTATGCGTCCGAGGTGATCTTTGCTGATGGGACGTTCATAGATGGCAGCACGAGTGAGCTCTCGTGTGATGGTCCGTTAAGGGAGCCTTTCTGTGTGTTCTGTCAGGGTGGCACTCATTGGACTCAGTGGGGGCTAGTTCTGGGTGAGGTTTTGAAGTCTTTGTAG 1365 45.86 MTAILSFITTSPIHSRLIKNSTTTSAFPLNSTSRLAIPNNHQHPAPLFLPEVESAVDALYPEFRAIDNLVACNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGISYREVDLADDGGLDWDALEVALKPQTKCALIQRSCGYSWRRSLSVNEISRAIHIIKSQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEEWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSIKGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYAKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLKSL 454
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dapi23g00441 454 Gene3D - 309 454 - -
Dapi23g00441 454 Gene3D - 100 308 IPR015421 -
Dapi23g00441 454 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 25 454 IPR009651 -
Dapi23g00441 454 Gene3D - 49 99 - -
Dapi23g00441 454 SUPERFAMILY PLP-dependent transferases 60 384 IPR015424 -
Dapi23g00441 454 Pfam Methionine gamma-lyase 53 452 IPR009651 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dapi23g00441 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
251708 Dapi7g00414 Dapi23g00441
387101 Dapi23g00441 Dapi7g00414
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Dapi Dapi-Chr23:9758370 Dapi7g00414 Dapi-Chr7:9044927 wgd